Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00355 ATGGCATTCAAGAAGTTCATAATCCGAAGCTACGAGGGTCACTCTGATAGAGCTCAGGTAGAAGATCTTGAGAGAAGATGCAAGGTAGGGCCATCAGAAAGCGTGCTAGACACTATGGGTGACCCCATGTGTAGGATCAGAAACAGTCCCATGTACATAATGCTGGTAGCAGAGATGGACAATGAATTGGTTGGTGTCATTCAAGGCTTAATAAAAATGGTAACAGTTCACACTCATCCTCCAAAGGATATGGCAAAGGTGGGGTATGTCTTAGGCCTCAGAGTTTCTCCTCATAGTAGAAGAAAAGGCATTGGCTCAAGTCTAGTGCAAAGGTTAGAAGAATGGTTCACTTCCAATGATGTGGAATATGCATACATGGCCACAGAGAAAGAAAACCACGCCTCAATCAACCTCTTCATGGAGAAGTATTGCTACACCAAGTTTAGGACTCCAACTATACTCATAAACCCTGTGAATCATCATCTGTTTCAAATCTCATCCAACATAGAGATAGCTATGGTCAAGGTTGAAGAGGCTGAATCCCTCTATAGAAGATTCATGGGTTCCACTGAGTTCTTCCCTAGTGACATAGAGAATATACTAAGGAACAAGCTAAGCCTGGGAACTTGGGTGGCTTATTTCAAAGGGGATAGTGATTTTGGTTTAGATGGACAAGTTCCCAATAGTTGGGCCATGCTTAGTGTTTGGAACTGTGGGGAAATCTTCAAGCTAAGGCTAGGGAAAGCACCTTTGTCTTGCATGTTATTCACAAAGAGTTGGAGCTTGATTGGTAGAATCTTCCCATGCATGAAATTGCCAACCTTGCCCAATTTCTTTAGTCCTTTTGGGTTCTACTTCATGTATGGTGTGCACCAAGAAGGGCCATTCTCTGGAAACTTGGTTAGGGCATTGTGCCAGTTTGTGCACAACATGGCTTCTAGAAGTGAACAGTGCAAGATCATTGTGACAGAAATTGGAGGAAGAGATGATCTGATTCATCATATTCCACATTGGAAATTGCTCTCATGCCAGGACTTGTGGTGCATAAAGACTTTGAACAATGAAGGAACTAACAAGTTTCATGAATTGAGCAACACTCAATCATCAATAACACTCTTTGTAGACCCACGAGAGGTTTAA 1140 0.4237 MAFKKFIIRSYEGHSDRAQVEDLERRCKVGPSESVLDTMGDPMCRIRNSPMYIMLVAEMDNELVGVIQGLIKMVTVHTHPPKDMAKVGYVLGLRVSPHSRRKGIGSSLVQRLEEWFTSNDVEYAYMATEKENHASINLFMEKYCYTKFRTPTILINPVNHHLFQISSNIEIAMVKVEEAESLYRRFMGSTEFFPSDIENILRNKLSLGTWVAYFKGDSDFGLDGQVPNSWAMLSVWNCGEIFKLRLGKAPLSCMLFTKSWSLIGRIFPCMKLPTLPNFFSPFGFYFMYGVHQEGPFSGNLVRALCQFVHNMASRSEQCKIIVTEIGGRDDLIHHIPHWKLLSCQDLWCIKTLNNEGTNKFHELSNTQSSITLFVDPREV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00355 379 CDD NAT_SF 54 125 - -
Phco3g00355 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 152 IPR016181 -
Phco3g00355 379 Pfam Acetyltransferase (GNAT) family 43 141 IPR000182 GO:0016747
Phco3g00355 379 Gene3D - 7 148 - -
Phco3g00355 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 379 - -
Phco3g00355 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 178 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00355 Phco-Chr3 2568227 2569521 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco3g00355 Acetyltransf_1 7.6e-16 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00355 3 2568227 2569521 Phco3g00355 3 2568227 2569521 ECH
Phco11g01700 11 13180909 13182052 Phco3g00355 3 2568227 2569521 PCT