Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00300 ATGGAAACCAAGAAGCTTCAGCTTCGCTTCTCGCTCGGCCGCCAATCCTCCCTCGCGCCGGAGCGCGACGCTGCGGAGGACGTGTCGGAGGCGCTGGATCCGACGGTTCGGTTGATGTATCTGGCCAACGAAGGAGACTTGGTCGGGATTGAGGAACTGTTGGACGCGGGGAGCGACGTCAATTTCACCGACATTGACGGCCGCACGGCTCTCCACGTCGCCGCCTGCCAGGGCCGCACCGACGTTGTTGACCTGCTGCTACGACGAGGGGCCGACGTTGATCCGCGAGACTGCTGGGGCAGCACCCCTCTAGCTGATGCAATGTACTACAAAAACCACGACATCGTGAAGCTTTTGGAGAAACACGGTGCAAAACCTCCGATAACTCCCATGCATGTGGAGAATGCTCGAGAAGTCCCAGAGTATGAGATTGATCCTTCTGAACTTGATTTTACTAATAGTGTTTGCATAACAAAGGGAACTTTCCGGATTGCATTATGGCGTGGAACTCAGGTTGCAGTCAAGACACTTGGAGAGGAAGTGTTCACCGATGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTGAGAAAATAAGGCATCCAAATGTAGTCCAGTTTTTGGGTGCTGTAACCCAGAGTACCCCAATGATGATCGTCACAGAATATCTACCCCAGGGGGATCTTCATGCCTACATTAAGCGGAAAGGTGCATTAAAACCAGTAACAGCTGTAAAATTTGCACTTGATATTGCTAGGGGTATGAACTATTTGCACGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATTTTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAAGTTACTAAAACAGTCAAAGAAGACAAACCTGTGACAAGCCTCGATACATCATGGCGATATGTTGCACCAGAAGTCTATAGAAATGAGGAATATGACACAAAAGTGGATGTGTTTTCTTTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCCACCGTTCTATGCAAAGCCAGAAAATGAAGTTCCAAAAGCGTATGTTGAAAATGAGCGGCCACCATTTAGTGCATTGCCAAAGCTTTATGCTCATGGACTAAAACAGTTAATTGAGGAATGCTGGGATGAAAAACCACACAGAAGACCAACATTTAGGCAAATAATTGGGAGATTGGAAGAAATCAACAACCATCTTATTCAAAAGAGGCGCTGGAAGATTGGAGCTCCCGGATGCATCCGGCACCTGGATGCCCTATTTAGGGGTAATCGCACAAGTCCAAGTAGCCGATCATCGCGCTCCGCGGCCAGATAA 1362 0.4743 METKKLQLRFSLGRQSSLAPERDAAEDVSEALDPTVRLMYLANEGDLVGIEELLDAGSDVNFTDIDGRTALHVAACQGRTDVVDLLLRRGADVDPRDCWGSTPLADAMYYKNHDIVKLLEKHGAKPPITPMHVENAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTQVAVKTLGEEVFTDDDKVKAFHDELTLLEKIRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLHAYIKRKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVTKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYAKPENEVPKAYVENERPPFSALPKLYAHGLKQLIEECWDEKPHRRPTFRQIIGRLEEINNHLIQKRRWKIGAPGCIRHLDALFRGNRTSPSSRSSRSAAR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00300 453 Gene3D Transferase(Phosphotransferase) domain 1 227 425 - -
Phco3g00300 453 FunFam Integrin-linked protein kinase family 16 142 - -
Phco3g00300 453 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Phco3g00300 453 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Phco3g00300 453 FunFam serine/threonine-protein kinase STY46-like 144 227 - -
Phco3g00300 453 CDD STKc_MAP3K-like 165 408 - -
Phco3g00300 453 ProSiteProfiles Ankyrin repeat region circular profile. 66 97 - -
Phco3g00300 453 Gene3D - 2 142 IPR036770 -
Phco3g00300 453 Pfam Ankyrin repeats (3 copies) 38 126 IPR002110 GO:0005515
Phco3g00300 453 PRINTS Tyrosine kinase catalytic domain signature 223 236 IPR001245 GO:0004672|GO:0006468
Phco3g00300 453 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Phco3g00300 453 PRINTS Tyrosine kinase catalytic domain signature 262 280 IPR001245 GO:0004672|GO:0006468
Phco3g00300 453 PRINTS Tyrosine kinase catalytic domain signature 333 355 IPR001245 GO:0004672|GO:0006468
Phco3g00300 453 ProSiteProfiles Protein kinase domain profile. 151 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00300 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 125 413 - -
Phco3g00300 453 SUPERFAMILY Protein kinase-like (PK-like) 157 411 IPR011009 -
Phco3g00300 453 PIRSF ILK 2 428 - -
Phco3g00300 453 FunFam Os01g0748600 protein 137 428 - -
Phco3g00300 453 Gene3D Phosphorylase Kinase; domain 1 144 226 - -
Phco3g00300 453 Pfam Protein tyrosine and serine/threonine kinase 168 407 IPR001245 GO:0004672|GO:0006468
Phco3g00300 453 SMART ANK_2a 99 128 IPR002110 GO:0005515
Phco3g00300 453 SMART ANK_2a 66 95 IPR002110 GO:0005515
Phco3g00300 453 SMART ANK_2a 32 62 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00300 Phco-Chr3 2130492 2136315 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Phco3g00300 PK_Tyr_Ser-Thr 2e-54 CL0016