Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00282 ATGCCATGTGGGGAGGTTTCTGTGAAAACAGAACTTGTGACCAATTTGGGGTGGAAGATGAGTTTCTTTTCATGTTGCAAATCATCAGAGAAGATCAACAAGAACTCATTCAGAAGGAGCAGCAAGGACTTCAATTATGAAAAAGCTATGCCATCATGTAGTAGCTTGTGTTTTAAACCTGATAACAGCAAGAGGAAGTACATAGAACAAGAAAAAGCAAAGATTGGAAAAGGGAATATTACCTCTCAGACCTTTTCTTATTACGAGCTATGTATTGCAACTCGGCACTTTCACCCTGAGAACATGATTGGTGAAGGAGGCTTTGGAAGGGTATACAAAGGACGCATTAAAAGCATACATCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCTGATGGTGAACAAAGGATCTTGGTATACGAGTACATGGTGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTGCGGACAGAAAGCCTTTGGATTGGCAGACTAGAATGAACATTGCAGCAGGTGCAGCTAAAGGACTTGAATACTTGCATGAGGTAGCTAATCCACCAGTGATATACCGTGATTTCAAATCATCAAACATACTATTAGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTAGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCCACAGGCCAATTGACTACAAAATCAGATATTTACAGCTTTGGAGTAGTATTTCTAGAGATGATCACAGGAAGAAGAGTAATTGATCAGTCAAGACCATCTCTAGAGCAAAACTTAGTCACTTGGGCACAACCACTGTTCAAAGACAGAAGGAAATTTACATTAATGGCTGATCCATTGCTAAAAGGGAACTACCCAGCAAAGGGTCTACACCAAGCACTAGCAGTTGCAGCAATGTGTCTTCAGGAGGAAGCAAATACCCGACCTTTGATTAGTGACGTGGTTACAGCTCTTGAAGTTTTAGCAAAGACGCAGATGCAAGTGGGAAAACAGCAACGCACAACAGAGACTTTTTTGGAGGACAAAGAATGCAGTTGA 1197 0.4119 MPCGEVSVKTELVTNLGWKMSFFSCCKSSEKINKNSFRRSSKDFNYEKAMPSCSSLCFKPDNSKRKYIEQEKAKIGKGNITSQTFSYYELCIATRHFHPENMIGEGGFGRVYKGRIKSIHQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMVNGSLEDHLLELPADRKPLDWQTRMNIAAGAAKGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTKSDIYSFGVVFLEMITGRRVIDQSRPSLEQNLVTWAQPLFKDRRKFTLMADPLLKGNYPAKGLHQALAVAAMCLQEEANTRPLISDVVTALEVLAKTQMQVGKQQRTTETFLEDKECS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00282 398 Gene3D Phosphorylase Kinase; domain 1 67 173 - -
Phco3g00282 398 PANTHER OS07G0668900 PROTEIN 40 382 - -
Phco3g00282 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Phco3g00282 398 FunFam Serine/threonine-protein kinase PBS1 174 390 - -
Phco3g00282 398 CDD STKc_IRAK 103 372 - -
Phco3g00282 398 Pfam Protein kinase domain 98 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00282 398 ProSitePatterns Protein kinases ATP-binding region signature. 103 127 IPR017441 GO:0005524
Phco3g00282 398 FunFam Serine/threonine-protein kinase CDL1-like 68 173 - -
Phco3g00282 398 Gene3D Transferase(Phosphotransferase) domain 1 174 397 - -
Phco3g00282 398 SUPERFAMILY Protein kinase-like (PK-like) 83 378 IPR011009 -
Phco3g00282 398 ProSiteProfiles Protein kinase domain profile. 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00282 Phco-Chr3 2019246 2022234 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco3g00282 Pkinase 2.6e-48 CL0016