Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00253 ATGATGATATCTGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGATGTCCTTCAGATTGCATTTTCTCTCCACATTTCCCTGCTAATGATCCTCAAAGATTTGCTTCTGTTCATAAAATCTATGGTGGCAGCAATGTCGGAAAAATGCTTCAGCAAATTCCACCTTATTTACGTGAACAAACTGCAAACTCTTTGTACTTTGAAGCACAATGTAGGATTCAAGACCCAGTTTATGGATGTGTTGGGATTATCTCAAAATTATATGAGGAAATCCGTAATACAGAAACTGAACTTGCCCAAATTCAGACACAGATTACCTGTCACAAGCTTCAAGTGGTGCAGGCAAATAATAATGCTGAAACAAACATGAACTTGTTATCAACAGTTGGAGCTGAAACCAATTTTCAAATGCCTGCACCAAGCACCAACCCTACAGAGTTTCAATGGCCAAATCAAGTTCCTTGGTTTCATTAA 477 0.3857 MMISGRCAACKNQRRRCPSDCIFSPHFPANDPQRFASVHKIYGGSNVGKMLQQIPPYLREQTANSLYFEAQCRIQDPVYGCVGIISKLYEEIRNTETELAQIQTQITCHKLQVVQANNNAETNMNLLSTVGAETNFQMPAPSTNPTEFQWPNQVPWFH 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00253 158 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 125 - -
Phco3g00253 158 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Phco3g00253 158 Coils Coil 85 112 - -
Phco3g00253 158 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00253 Phco-Chr3 1834838 1835653 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco3g00253 LOB 1.8e-37 No_clan