Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00188 ATGAAGAACACAAGAGGTTTTTCTATGTTGATGCTATTTTTCTTTGCTATCCTTTTCTTTATCATAGAATGTACAAGAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCCTAAGAGCAGTTGATCCCCAAAACGTGCTTGATAACACTACCTTAGTTGGATCACCATCACATTTGTGCTTGGTCAAGTTGAATGGTGTAAGATGTGACTCAAATGCTACCAATATTGTGCATATAAGGCTTGAGAACTTGAACCTTAGTGGCACAATTGACGCAGATTCCCTTTGCAGGCTCCAAAAGTTAAGAGTGTTGAGCTTGGCTAACAACAACATCAGAGGAACCATTCCACCTTCAATTTTGCATTGTACAAGGTTGACACATTTAAACTTAACCAGCAACCAATTGAGTGGGAGGTTGCCAATGGCCTTAACAAAATTGAAACATCTAAGGAACTTAGACATCTCCAATAACAAGTTTTCTGGTATGATTCCTAGTAAACAACAATATAGGCAACTTTCTACTTATTATTTGACACCAAGTAATAAGTTGGAAAACAATAGTACCACAGAGGGGCTAAAAGAAAGTGACACAAACACAATGCAGCAACTGACACCAGATTATTTACCAGACACTGCTTCTGATAATGCCAATGGTTCAAGGAATTGGAAGACTGGAACTTTGGTGATGTTACTTTTGGGCACTGGGGTTCTTTTGTCATCCTTTTACTTTATGGTAAAGAAGTCATCAAAGTTAAATGAAGGGACAGAGGTAGTTAAAGAGAATCATGATGTGTTAAAGGCTCCACCTAAAGAAGTTCAAGAGGTGAACCTAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAAAGGTTCACACTGGAGGATCTGCTTCGAGCCACTGCGGACTTGAGGAGTGAAGGCTTTTCCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATGATCACTATGCAGTCAAAAGATTGAAGAATTTGCAGGTTTCCTTGGAAGAATTTGGTGAAACATTGAGGAAGATTAGTAGCTTGAAGCATCAAAATATTCTCCCCCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAATTCATCATTTACAAATATCAAAACAATGGAAGCCTACTTAATCTGTTAAACGATTATTTAGCAGGCAGGAAAGATTTCCCATGGAAACTGCGTCTGAATATAGCATGTGGAATTGCAAGGGGATTAGCCTTCATATATAGGAAGTTAGAAGACAAGGAGGAGGTGATTCCTCATGGAAATCTGAAGCCATCAAACATCCTTCTAGATGAGAACAATGAGCCACTGATAAGTGAACATGGTTTATCAAAATTCATGGACCCAAATAGAGGTTTTCTCTTTTCTTCTCAGGGATACACAGCTCCTGAAAAGAGCCTAACAGAAAAGGGTGATGTGTACAGCTTTGGAGTGATTCTCCTTGTTCTGCTAACTGGAAAAAGCATAGAAGTGAGCAGAATAGACCTTGCTAGATGGGTGAGGTCCATGGTGAGGGAGGAATGGACAGGAGAAGTCTTTGACAAGGAAGTTAGGGAGAATGAGCATCAATGGGCATTTCCTCTTCTGAACATAGCCCTCTTGTGTGTGTCACGTTTCCAAGAAAATAGGCCAACCACTGTGGATATTTTGCAGAAGATAGAGGAGGTCATGGATCAACATGAACAATATCAGGAACGTTTTGCTTCCAAATGCTGTTCCAATGGATCCAACCGTGATGAGTGTTGTTCACTTCACAAGATCATACCTGAAACATGGGATTCTCCAGGATCAAATTATTGA 1824 0.398 MKNTRGFSMLMLFFFAILFFIIECTRGELSESESFFNFLRAVDPQNVLDNTTLVGSPSHLCLVKLNGVRCDSNATNIVHIRLENLNLSGTIDADSLCRLQKLRVLSLANNNIRGTIPPSILHCTRLTHLNLTSNQLSGRLPMALTKLKHLRNLDISNNKFSGMIPSKQQYRQLSTYYLTPSNKLENNSTTEGLKESDTNTMQQLTPDYLPDTASDNANGSRNWKTGTLVMLLLGTGVLLSSFYFMVKKSSKLNEGTEVVKENHDVLKAPPKEVQEVNLKEGDSELVFFVEDRERFTLEDLLRATADLRSEGFSSSLYKVKLENNDHYAVKRLKNLQVSLEEFGETLRKISSLKHQNILPLVGYRSTSEEKFIIYKYQNNGSLLNLLNDYLAGRKDFPWKLRLNIACGIARGLAFIYRKLEDKEEVIPHGNLKPSNILLDENNEPLISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLVLLTGKSIEVSRIDLARWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALLCVSRFQENRPTTVDILQKIEEVMDQHEQYQERFASKCCSNGSNRDECCSLHKIIPETWDSPGSNY 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00188 607 Gene3D Phosphorylase Kinase; domain 1 270 376 - -
Phco3g00188 607 ProSiteProfiles Protein kinase domain profile. 302 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00188 607 Pfam Protein kinase domain 311 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00188 607 SUPERFAMILY Protein kinase-like (PK-like) 296 561 IPR011009 -
Phco3g00188 607 Gene3D Transferase(Phosphotransferase) domain 1 378 586 - -
Phco3g00188 607 Gene3D Ribonuclease Inhibitor 32 219 IPR032675 -
Phco3g00188 607 PANTHER OS05G0588300 PROTEIN 9 570 - -
Phco3g00188 607 SUPERFAMILY L domain-like 59 167 - -
Phco3g00188 607 FunFam Leucine-rich repeat receptor protein kinase EMS1 93 190 - -
Phco3g00188 607 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00188 Phco-Chr3 1361778 1364103 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phco3g00188 Pkinase 2.6e-22 CL0016