Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00181 ATGGCTGCTTCCATGTCTCTCTATCCCTATAAACCCCTCCTATACTTTTCGACTCCTTCGTGTTTTTGTTCTCAATTTCGGAACTTGGAGAGAGGGCATTTGGGTTCTGCAAGGTTGAAGAGTTTAGTGAAACTTGCAGCACATTCAAATCCGAACATTCTCAAGACCAACAGGAGGTCAAAGTATGGAGAGACACTGTCTCTGTACGATAGTGATGAAGAAGATGAAGAAATGGACGAGGAGGAGGAGGACGACGAAGATGATGATGATTGGCTTTCTGATGAGGAATTTGCTGAGCCTGCTAAATTTGGTGTTAGTAACAAGAGATTGAAGTCGAAGACAGTTAAAGGAAAAGATAAAGAGAAGGAATGGGAGTGGGGTTTGAGATCTTTGGACAACGAACAAAGCATTAGATTGCCTAGAAGTGAGAGAGTGGCATCCTTACAACGAAATGAGAGTGGAAAGGTTAGTAGAAATGTAAAGAATAAAAAATATCCGCGGTTGTCCGAAGAGATTCCTTTGGATTTGAAATGGTTACCACTTCTTGATTACTTGAGCACCTTTGGAATGAAGGAATCACACTTTATCCAAATATATGAAAGGCACATGCAAGCACTTCAAATTAACGTTAGTTCTGCACAGGAAAGGTTAGAGTACTTAATGAGTGTTGGTGTTAAACATAGAGATGTAAGAAGAATCCTTCTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCTTTCTTGAGAGGCCTGGGCATACCGAATTCTAGAATAGGGCAAATCATTGCTGCTACTCCATCCTTGTTTTCTTACAGTGTTGAGAATTCGTTAAAACCTACAGTTAGATATTTAGTTGAGGAAGTAGGCATCAAGGAAAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAAAGAATTGACATTTCATGGAATATGCGTTATATGTTTCTTACCAAGGAGTTGGGTGCACCCAGGGATAGCATTGTGAAGATGGTGAAAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCTTAAGGAGCATAGGAATGAAAAATTCAGATATCTTGAAAGTATTGACTAGCCTAACACAGGTGCTATCTCTGTCCTTGGAGGAAAATCTAAGACCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAGGTGCAATCCTTGACCAAGTACCCAATGTATCTTAGTTTATCCTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTAGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCCCTTGGATCTCTTGTACCAACTGATGAATGTTTTTGCCAACAATGGGCTGGAACAAGTTTGGATAAATATTTGGCATTCCGTCAGAGATTATTACTTCAAAAGTTTGCTGAGAAATATGAAAGAAAAATTTGCTACAAGATGTTCTTGTGGCTGAAGCTCAGTCAGTCATTAGAGTTTGTTCAGCCATCTGGCATACCGTCTGCACATGATTTAATGACATTCAAAGCAGTGGCTTATTCTCGGGAGAAGCTGCTCAACTAG 1602 0.3976 MAASMSLYPYKPLLYFSTPSCFCSQFRNLERGHLGSARLKSLVKLAAHSNPNILKTNRRSKYGETLSLYDSDEEDEEMDEEEEDDEDDDDWLSDEEFAEPAKFGVSNKRLKSKTVKGKDKEKEWEWGLRSLDNEQSIRLPRSERVASLQRNESGKVSRNVKNKKYPRLSEEIPLDLKWLPLLDYLSTFGMKESHFIQIYERHMQALQINVSSAQERLEYLMSVGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLRGLGIPNSRIGQIIAATPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNMRYMFLTKELGAPRDSIVKMVKKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLRPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLQKFAEKYERKICYKMFLWLKLSQSLEFVQPSGIPSAHDLMTFKAVAYSREKLLN 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00181 533 MobiDBLite consensus disorder prediction 65 91 - -
Phco3g00181 533 Gene3D Transcription termination factor 3, mitochondrial 240 477 IPR038538 -
Phco3g00181 533 Coils Coil 196 216 - -
Phco3g00181 533 PANTHER CGI-12 PROTEIN-RELATED 180 461 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 267 299 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 304 336 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 196 226 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 377 409 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 FunFam Transcription termination factor MTERF9, chloroplastic 242 477 - -
Phco3g00181 533 Pfam mTERF 245 437 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 Pfam mTERF 183 256 IPR003690 GO:0003690|GO:0006355
Phco3g00181 533 MobiDBLite consensus disorder prediction 69 91 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Phco3g00181 mTERF 1.4e-44 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g00181 3 1319381 1321616 Phco3g00181 3 1319381 1321616 ECH