Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00148 ATGGTGGCTCGCCATACAGATAGTGTTACAGAGACAGTTCTCCATTCACTGATTGATTTCTTGTTGATTCTTGGAGCAGGAATTGGCACGTGCATGTCCATGGTTGTCTTCTTCATCTTCATGCTGTTCTTCGGCGCCTTGTCTGAGGTCACAGCCACACAAAACAACGTCAGCTTCGCCTTCCCTTCTTTCACTCTCAACAACACCAACATCACCCTTCTCGGAGATTCCTTTCTATGTAGCAACGGCGTTGTAAGACTCACCAACGCCGTCCCCACTTCCAGCTCCGGCGCCGTCATCTACACCTATCCCATCCCACTCTTCCACCCTCCAACCGCAACCTTCGCCTCCTTCTCCACCACCTTCTCCTTCTCCATCAACAACCTCAACCCCACCTCCTCCGGCGACGGCCTCGCCTTCTTCCTCTCCCCCAACAACACCGCCACCAACCTCTCCTTCTCCGCCCCACTTGGCCTCCCCTCCTCCTTCGTCGCCGTCGAGTTCGACACGCGCCTCGACTCCCGCTTCGACGACCCCAACGAAAACCACGTCGGCTTCGACGTCAACGCCATGAAGTCCCTCAAAACTGGTGACCCCATATTGCACGGCATCGACCTCAAGAGCGGCAAGACCATCATCGCATGGATCGACTACAACGCCGATCGAACTTTGGTCACCGTTTTCTTGAGCTATTCACTTCCAAAACCCGTCGACCCCGTCCTCTCCGTCAAGTTCAATCTTTCTAAACACTTGGGAAACCCCGTCTACATTGGATTCTCCGCTTCCACTCCAGGAATCACCGAGATTCACCAAATCCATAGTTGGACCTTTCACAGTGCTTTTGCTCCCCCAAGAATGAGGTTGCACCCTCACAACGTTTCCGTGGTGGGAACTGTTCCTATTTCTGGTTCAGGTTCTGCTTCTGTTTCTAATTCAAGCACTAATTCTACTTCCAAGAAGCGTGACAAGAGGGCTGGCATTGGTGTGGTTGTTGCGGGTTCTGTCTCTTTCTTTGTGGTTTTTTCAATCTTGGGTTATGTTTTTGTTCGGAGACGGAGGGGTGGGAGAAAAGAGAAGTTTCAGAATGGTTTCGTGGCGTGTCCTAGGGCGTTTGATTACAAAGAGTTGAAGTCTGCGACAAGAGAGTTTCACCCGAGTAGAATAGTTGGACATGGATCATTTGGGACGGTGTATAAGGCTTTCTTTATCTCTTCAGGAACTATTGCTGCAGTGAAAAGGTCGCGGCACTCTCACGAAGGGAAGACTGAGTTTCTGGCTGAACTCTCCATCATAGCTGGTTTGCGGCACAAGAATTTGGTTCAGCTGCAAGGTTGGTGTGTTGAGAAGGGGGAGTTGTTGCTGGTGTATGACTTTATGCCCAATGGAAGCTTAGACAAGATGCTTTACAAGGAACCTGAACGGGGGAGGTTGTTGAGTTGGTCTGACAGGGTGAACATTGCTCTTGGGTTGGCCTCTGTGCTGGTTTATCTTCACCAAGAATGTGAGCAGAGAGTGATTCACAGGGACATCAAGGCTGGGAACATATTGCTAGATGGAAACATGAACCCTAGGTTGGGGGATTTTGGATTGGCAAAGCTGATGGATCATGACAAGAGTCCAGTGTCCACTTTGACTGCTGGAACAATGGGGTACCTAGCACCTGAGTATCTTCAGTATGGAAAGGCCACTGACAAGTCTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAAGTGGGTTGTGGGAGGAGGCCAATTGAGAGAGAAGGGACGAAGATGGTGAATCTGATTGAGTGGGTTTGGGGGCTGCACTATGAGGGGAAGGTGATTGAAGGTGCTGATAAGAGGTTGAATGGGGAATTTGAGGAAGAGGAAATGAGGAAGCTTTTGCTCTTGGGATTGAGTTGTGCTAACCCTGATAGTGCTGAGAGGCCTTCCATGAGAAGGGTGCTCCAGATTCTGAACAATGAAGCTCCACCACTTTTTGTGCCAAAAGTTAAGCCTACACTCACCTTTTCTTCTGACCTTCCCCTCACTATTGAAGACATTATGTCTGATGGTGAAGAGTTCAGTACTAGCCAGTCTATGTGTGAGATCAAAATCAACTGA 2106 0.4967 MVARHTDSVTETVLHSLIDFLLILGAGIGTCMSMVVFFIFMLFFGALSEVTATQNNVSFAFPSFTLNNTNITLLGDSFLCSNGVVRLTNAVPTSSSGAVIYTYPIPLFHPPTATFASFSTTFSFSINNLNPTSSGDGLAFFLSPNNTATNLSFSAPLGLPSSFVAVEFDTRLDSRFDDPNENHVGFDVNAMKSLKTGDPILHGIDLKSGKTIIAWIDYNADRTLVTVFLSYSLPKPVDPVLSVKFNLSKHLGNPVYIGFSASTPGITEIHQIHSWTFHSAFAPPRMRLHPHNVSVVGTVPISGSGSASVSNSSTNSTSKKRDKRAGIGVVVAGSVSFFVVFSILGYVFVRRRRGGRKEKFQNGFVACPRAFDYKELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGRLLSWSDRVNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKSDVFSYGVVVLEVGCGRRPIEREGTKMVNLIEWVWGLHYEGKVIEGADKRLNGEFEEEEMRKLLLLGLSCANPDSAERPSMRRVLQILNNEAPPLFVPKVKPTLTFSSDLPLTIEDIMSDGEEFSTSQSMCEIKIN 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00148 701 CDD STKc_IRAK 389 655 - -
Phco3g00148 701 Pfam Legume lectin domain 57 283 IPR001220 GO:0030246
Phco3g00148 701 ProSiteProfiles Protein kinase domain profile. 383 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00148 701 SMART serkin_6 383 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00148 701 Pfam Protein kinase domain 384 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00148 701 PANTHER - 70 658 - -
Phco3g00148 701 SUPERFAMILY Protein kinase-like (PK-like) 366 676 IPR011009 -
Phco3g00148 701 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Phco3g00148 701 Gene3D Phosphorylase Kinase; domain 1 348 458 - -
Phco3g00148 701 Gene3D Transferase(Phosphotransferase) domain 1 459 658 - -
Phco3g00148 701 CDD lectin_legume_LecRK_Arcelin_ConA 57 279 IPR001220 GO:0030246
Phco3g00148 701 Gene3D - 54 293 - -
Phco3g00148 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Phco3g00148 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 283 IPR013320 -
Phco3g00148 701 ProSitePatterns Legume lectins beta-chain signature. 164 170 IPR019825 -
Phco3g00148 701 FunFam L-type lectin-domain containing receptor kinase VIII.1 459 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00148 Phco-Chr3 978793 980898 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco3g00148 Pkinase 1.9e-48 CL0016