Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00097 ATGTCTTCAACAACTTCTTCTTCTTCTTCCTCGTCATCATCATCAACTTCAACCCCATATGACGCTGTTGCTCCTGATATCCCTGGCCCTAGTACGAGGAGAACCGCTCAATTTGAAGGCCCCTCCTCCTCTCGTCAACGTGCTATGAATGAGGTTTTGCCTGAACCTTTTCTTGAAGCCTTGGCCAACCAACTTGCCCTTGATGCTGCAAACTACAATGGACGTCTTGCTGCTGCTCCTGCCCTTGCCAATTTGTTTCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATCTGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGACGTTCCGAGTGAGTGACACGTGGCACAGGGAGTACATCAACTGTCATCGGACGGCGAGGAACTTCGAGACTGGAAGGCTGACGTCTTCGACTCCGCAGTTCAATCATTCGGAGCGTCGCCGGAGCTTGATCTGCCGCTGCCTAGCCCTTTCTGACACCCGCCTTGCGTGCGGCTTCGTGGACGGCACAGTGCGCGTCTTCGACCTCGAAACCTACGACCACGTCAGCACCTTCCTGTCCGACCACGGCCACCTCTTCGGGCCCTTCTCGCGCTCCGTCTCGGGAATTGTTATCACCGACTCGAACATCACTTTCGCCAGGCTGGACGGGGATATCTACGTGGACGCTATCGACGTGCATGGGCAGAGCCAAGCGCGGCGGGCCGTGTCGGGGTTCGTGATGAACAACGGGGCGTTGGTCGGGTTCGCGGGAACGCGGCGGTGGTGGGTGGGCATGTTCGCGGGGATAGCGGGCCGGGCCTTTCAGGTGTGGAACGCGGAGAGCGGGGAGAGCGTGTTCGTTGGGGGGCGGTTGACAGATCCGGAAACGGTTATGGGGTGGCATATGCTGACGGAGTTGGTTGAGCCGGTGGGGCGCGTGCGCGTGACGGAGGGTGAGTTCGTGGTGGCTTGCACTGGTTTGAGGCTGATCTGTTTCAATGCTTGGAACCCCGGGGTTCTGCTGCGGGATGTGATGTCGGCGTCGGGGTTCGTGGTGAGTTCGATGGACGTGAGTGAGGAGGCTTTTGTGGTGGTGGAGCGTGAGGGAGTGGGAACGGTTTGGCGCGTGGGGACGATGGAGTTGATGAGCAGGTTCCTGTTGAGGGGTTCGTGGGTTCGGGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGTTAACCTACTCTCCTAACCCTACACCATTCGTGAGGGTTTGGAACATTGAACAAGAGGAAGGACGGATGTGTGTGAGAGTGTATCTGCGTGCAGGAGAGGTGAATAGCATGGTGGCTCATCATACACACATGGCTATCTCTTCCAGCCACATTAACCTATTGGATTTTGGTGTACAGGAGGATCCTTAG 1398 0.5758 MSSTTSSSSSSSSSSTSTPYDAVAPDIPGPSTRRTAQFEGPSSSRQRAMNEVLPEPFLEALANQLALDAANYNGRLAAAPALANLFQVCSTWREVSRSDLLWEHLTRRIWRRTFRVSDTWHREYINCHRTARNFETGRLTSSTPQFNHSERRRSLICRCLALSDTRLACGFVDGTVRVFDLETYDHVSTFLSDHGHLFGPFSRSVSGIVITDSNITFARLDGDIYVDAIDVHGQSQARRAVSGFVMNNGALVGFAGTRRWWVGMFAGIAGRAFQVWNAESGESVFVGGRLTDPETVMGWHMLTELVEPVGRVRVTEGEFVVACTGLRLICFNAWNPGVLLRDVMSASGFVVSSMDVSEEAFVVVEREGVGTVWRVGTMELMSRFLLRGSWVRGLWGCMNLGYVLTYSPNPTPFVRVWNIEQEEGRMCVRVYLRAGEVNSMVAHHTHMAISSSHINLLDFGVQEDP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00097 465 PANTHER WD40 REPEAT PROTEIN 12, 37 12 421 - -
Phco3g00097 465 MobiDBLite consensus disorder prediction 1 21 - -
Phco3g00097 465 SUPERFAMILY WD40 repeat-like 154 441 IPR036322 GO:0005515
Phco3g00097 465 MobiDBLite consensus disorder prediction 1 47 - -
Phco3g00097 465 SUPERFAMILY F-box domain 81 129 IPR036047 GO:0005515
Phco3g00097 465 Gene3D - 43 135 - -
Phco3g00097 465 Gene3D - 157 456 IPR015943 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Phco3g00097 None None None