Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g00074 ATGCCTGCAGAGAAGTCGAACAGTTGCGACTCCGAAGTGGAAGCGTTCGTGGAGATTGATCCAACGGGAAGGTTTGGGCGTTACAACGATCTTCTCGGTTGTGGAGCTGTGAAGAAGGTTTACAGAGCTTTTGATCAGGAGGAAGGAATTGAGGTGGCGTGGAATCAGGTTCGGCTCAGGAATTTCAGCGAAGATCCTGTTCTCATCAACCGTCTTCATTCTGAGGTTGAGTTGCTCAGAACCCTCAGCAACAAGTACATCATCGTCTGTTACTGTGTTTGGAAGGATGAGGAACGCCACAACATCAATTTCATCACTGAGATTTGCACTTCCGGGAACCTCAGGGATTACCGCAAGAAGCACCGCCATGTCTCCATTAAGGCATTCAAGAAGTGGTCCAAACAGGTCCTCGAGGGGTTGGAGTATCTTCATACTCATGACCCATGCATCATTCACAGGGATCTCAATTGCAGCAACATCTTTGTTAACGGCAACATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGACGGAACCATGCTGCACATTCTGTTTTAGGGACGCCTGAATACATGGCACCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAAATGGTTACAATGGAGATACCCTACAGCGAATGTGACAGTGTGGCGAAGATATACAAAAAGGTGACTAAGGGAATAAAGCCTCAGGCCTTGAGCAAAGTGACAGAACCTGAGGTGAAGGAATTCATTGAGAAGTGCATAGCACAGCCAAGGGCAAGACCTTCAGCCACGGATCTCCTTAAGGATCCTTTCTTTTATGAACTCAACGATGATGAAGAATCAATGCCGATAAATTGA 894 0.4653 MPAEKSNSCDSEVEAFVEIDPTGRFGRYNDLLGCGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLINRLHSEVELLRTLSNKYIIVCYCVWKDEERHNINFITEICTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRNHAAHSVLGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTKGIKPQALSKVTEPEVKEFIEKCIAQPRARPSATDLLKDPFFYELNDDEESMPIN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g00074 297 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Phco3g00074 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 287 - -
Phco3g00074 297 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Phco3g00074 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00074 297 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Phco3g00074 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g00074 297 CDD STKc_WNK 24 284 - -
Phco3g00074 297 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Phco3g00074 297 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g00074 Phco-Chr3 491029 492418 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Phco3g00074 Pkinase 9.9e-51 CL0016