Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03072 ATGTTTAGTATAAGTTGCGGGTTTGGGTCTATGTTAAGCTATGCCCCTATTGTCTGTTGTTTGTGTCTGGTACCGCCTCACATTGTACCTGGTGATGCCATAGTTGTTAATACAGAGGATGACTCCTACATAGAAAGATTCGGAAATTTCAAACATGGGGTGCTTTTTTGGTTGGTTTGTGCAGGACCAGAAGCACGTAAACTATTCATAAACCCTCGTCCTATTTTTATGAGGTCGGAGTCTGAGCCAAACATAAACAGATTCGCCGTATCTCATTTGCAGCCAAACCCTAATTCAATTCACCGAAGCCTTCATAACAGTATTCCAGTCATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAGATATCATGGTTCCAGTTTCTTCCTCATGAACCGGACCTGAACCCTCTACCTGACAAAAGTGTAAAAGTGGACCAAAAGGATGCCGCAAATTTACTGGTGCTTTCATCACATCTGCAACTGCAGAAGGAGGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCTTCCCAGGGCTTGCATAATCCAGACGAAAAGATTAAGCTGTGGCTTTTTCTTCCGGGGCGTCATTCATCAGTTGTTGAGACTGCTCAGCCAGCAGTATCCAGATTAAGAGTTGTTGCTTCTGGGCTTTGGTTGGCTCCTGGCGATTCAGAAGAGGTTGCCACTGCTCTCTCTCAGGCTTTGCGGAATCGTATAGAAAGGGCTTTGCTTGGGTTATATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGCGAAGAACTGTTCAGAAGAGGACAACCTGCAGTTGAATTTGCCTTTGCTGCAACTGAGGAAGCCATCTTCATACATGTCATAGTGTCCTCAAAGCATATCCGGATGCTTACCACGAGTGATCTGGAAAAAGTATTAAAACATTCGATGGAGTCTGCATGTAGACTTCCAGTGATTGTTCCTCCTCATGGAATTCGTGGCAGCTTGACTGGTTGTTCTCCAAGTGATCTTGTCAAGCAAAGCTATTTCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTACCATATAATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAAAATTGTTATGTTGAAGTAAGTATGGGCTTCCCTAGATCTGGAACTGACAACTCGTTGCAGCCAAACAGAACTAGTGCCAGGAATTTATCCACACTTCATGTTGCCGAATCTCCTATTACAGGACGAAGTGATCACAAGGGATCAGCAGATCACTTGTCAGATTATGAGAAAACATTTTTGTATCCAGCTGAGGCAGTGCTCGTGCCAGTTTTACAAACATCATTAGCAAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCTCTTCCCAGTTCCTCTTCCTTAATTCACTGTGCTGGTAATGTTGATTGTTGTGAGGATCCTTGGACTGAAATCAATGGAGCCCGTACGCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGTTCTAGTGATAGTGATTACAAGACTACGGGACCAAGTGAACTGGAGGCAGATGCTGATTCTTTAACGTGTAGACAGTCTATGGTGTCTTCTGCTGATCAACTGGAAAGTGATGGCCCCAAATTGGGCTCTAAGAGGTCTCGAACAGGGGTGACAGAGTCATTAAGTACAGCTGCAAACATTCCTGTGCAAGATACTTACATGTCTGATTTTGGTTCCGTGGAAGTGAACAATTCAGCCATTACAGGAGTGGGAAATGAGCCAATTGGGTCTTACTGGGACTGGGATGATGATGATAGAGGCATGGAAATGGATATTCAAGCCCTTCTATCAGAATTTGGTGATTTTGGTGACTTCTTTGAAAACGACGTCTTGCCTTTTGGAGAGCCCCCAGGAACAGCAGAATCTCAGGCACTTATGTTTTCTTCCCCGGATTATGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGACGTTCCAGATCAAATACTTTTGCCTGTTGGGTTTCCTTCCTTTGAGAGCTTTAATCCCCCTCCTTCAACATCTGTGGAGGAATGTCTTAATAGAAGTCAAGATAACTTAAATAACTCTATGTCTTTGGGTCCAACCAATCACACTCAAATGTTGTATACCAGGGAATTTGATCATATAATGAAAGCTGAAGCGATGATGACATTTGCTCCTGAATTTGGTGCTGTTGAGACCCCTACCTGTGAGCTGTCCACAACCTTATTCAGAAGCCCATATTTTCCAAAATGTCGTAAAGCAGAGAGTTCCAATTCAAGCTCAAACAATTACTTATATGGTGCAGCACCACCCTCTTCTCCTTGCACCGAAGGATCAGAGGGTAAGAATGGAATGTCTTTCAATACAAAAACTGGTTCTGGAAAACATGATTCTGGGACAAGTCTCCACTCAAAACATTACTATACATTTGTGGAAAGTAGGAAAGAAAAAAATGATAAAAATCCTGTTGTATGTAATGATAATAGCATTGCTAAATCTGAGGGGATATTGTCACTCTCAAACATTGGTTCTAATGCTATTGTCAAACCTTCCCCTAGGAAGACAGCTGAAGGCACACATGAACCAGAGCATGCTCTTCTATCTGCAAAAACTTTGTTGGCAACTGATATCACATGTGTTATGTTGCAAGCTTCTGTGTGCAGATTACGTCATATTCTCTTATCTTCAGGTAACCTAATGCCTGTTGGTTTCAGTAGGTCAACTGGGGTTTCATTTTTTAATCAGCTTCCTAGTGAACCAAGTACAACAACAGACAACATATCTGGGAAGTATGATGTGAAGAAGAAAGAAAATATACCAATTCGTATTGCCGGTGATATTGATGGAGGAATGCTTGATGGTCATCTGAATGCCCCTGTTGGTGTTTGGCGCACATTAGGAGCTTCAAAAGTTGTAAAACCTTCAAATTCACCTAACATGGAAGTTGGTCCTTCTTTTTCTCATAATTCTTTCAATGAAGAAGGTATTCTTTCTTATGGTCAAAGGAAACCGCTTCAGGAGCTCCTTGATGGGATTGCTTTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGCAGATTGTGGTGATGGTCCTTATGGTTTACTTGCAATGCAAGAACAATGGAGGCGTGGATTCTGTTGTGGCCCTTCCATGGTTCATGCTGGCTGTGGGGGGACTCTTGCCTCTTCTCATTCTCTGGACATTGCTGGCTTGGACTTAGTAGATCCACTTTCTGCTGATGTTCATGCATCCACTGTCATCAGTTTGCTGCAGTCTGACATAAAAACAGCTTTGAAATCTGCCTTTCCCAATTTGGAAGGGCCATTGTCTATAACTGATTGGTGCAAAGGATGCAATCCATTGGTTGATACTGGAAGCATAGTTGAGGGAGTCTCTGTTGAATCGACCAATAATGAATGTAGAGATTCTTCAGAACCAATGAGTCCATCCCAGTCATCTGTTGGTGGATCTTCTAGCATTAAGGTTTCCAACATCGTGGATGGTGCTAAGGGGGATGAGACTTCTCAAAGGAGGTCTGGCCACGATTTATGTAATACAGAGTCAGAGCAGCAAACATGTGCCCGGCTTAAACCTACGCTCATTGCTCTTCCATTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTCCTTGCAGCATTGGGAAAAAGCTCCTCTAGAGCCCTATGCTCTACAGAAACCTATTACGTATCATGTTGTCTGCCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAGACATGCAAGCTAGGTACTCATTCACCTCAAGGCTTGGGGAATCAGATGGAGATAGAGTCTTCGAAGTTGTCATCTTGTGGTTTTGTTTTACTTGACTGCCCCCAATCAATGAAGATTGAGAGCAGTAATGCATCTCTTGTTGGTTCAGTGAGTGATTATTTTTTATCATTATCAAATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCTAAGGCACTTAGAAGTTTGAAAATTGGCTCTTGCTTTTCTACAAACCCCAGCGAAGGAAGTAACAGTTCGTGCTTGGTAATCTACGTGGTGTGCCCTTTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCTGTAGCGATTGGATCAGTAGTCCAACAGTTGGATAGAGAGAGGAAATCTAGCTTGCATAGTCAGGTTGTGAAGGCATTAAGTGGCTTGGCTACTGTTGACGAGGCTTCTCCATCTAATATCCTTGTGCTTTCTGGGTTTAGTATTCCAAAATTGGTCTTGCAGATTGTTACAGTGGATGCCATTTTCAGAGTCACTAGCCCATCTGTCAGCGAACTTGTCATTTTAAAAGAGACTGCTTTTACTGTTTACTGCAAGGCTCGTCGAATTTCACGTGGAATCTCTAGTGATTTTGCTCAGTCTGCATTTTCTGGAAGATCTCATTCTGTTTTGACGCAACTGCCTTCTCCCATCTCTGGCATGTGGAAAGACTGTGTTGGTCCTCGAATGGCTGGACATTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGACCTGGTACTTGGGATAATTCTTGGCAGCCAACAAGGACTGGGGGGTTAAACTGTGATCCAAGTAGAACTGGGGATAGTTTTCTCCATGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTGGCAGAACCAGGTTCACTTGAAAATGGTATTTCAGTTATTGGTAGTCCCACTTCAGAATCTTCCAAGGCATTGGTAGATGACAGTAGTGGTAACTATGTACAGAGTACAAGTACAGCAGGAAGTGTGGAGTCTGCTTCAAGCGCTGATGGATCTGGATCTGATCCGAAGACTCCTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAGGGGAGAATTGCTGGACTGTAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAGGGTCTGCAGTGCCTATTTGTTCAAATTCTTCAGCAAGGCTGTCTGATTATTCAATCTTGTGACCCTGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTTTATGAGCTTGAGTATCTTGAGTGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGATGGCCTCTACAATTGCGGAAATCTATGTCTGACGGGTTGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAACCAGACATGAGTTTGATCCCAGAACGAACTCTTCCTTCTTCACCTAGTCCCTTGTACAGCCCGCATACCAAATCCACTGGTTTTATGAAAGGCAATTTAGGGCAACCTGCTGCAAGAAAGCAGCTTATGGGTGGACATTCTATGGTTGACAATTCAAGGTGTTTGCTTCATTGGGCACAGAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACGATACAACTAGTTCTCCCAGCAGATTCCTCCACTCCTAGTTACATCGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACGTCTTCTGCATACATCCTAATTCCTTCTCCCAGCATGCGATTTCTTCCTCCAACAGTTCTTCAACTCCCCACGTGCCTCACAGCAGAGTCACCACCTCTGGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCTCTCTCTACTGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGACTACAGGAGCAACCTAAAAGAAGAATGGCCCTCTATACTTTCAGTGAGCCTTATTGATTATTATGGAGGTACTAACATCCCCCAGGAGAAAGTTGTCCGAGGAATTAACAAGCAAGTTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTATTGCAGCAGAGCTTCATGCCTTGTCTTGGATGACAGTGAGCCCCACATACTTAGAGCGGCGAACAGCGCTTCCCTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCCGATAAAGAGCTCAGCAAGCATTCAGATAAATCTTGA 6189 0.433 MFSISCGFGSMLSYAPIVCCLCLVPPHIVPGDAIVVNTEDDSYIERFGNFKHGVLFWLVCAGPEARKLFINPRPIFMRSESEPNINRFAVSHLQPNPNSIHRSLHNSIPVMWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDQKDAANLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQPAVSRLRVVASGLWLAPGDSEEVATALSQALRNRIERALLGLYYMRFGDVFSKFHQFQSEELFRRGQPAVEFAFAATEEAIFIHVIVSSKHIRMLTTSDLEKVLKHSMESACRLPVIVPPHGIRGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPYNVSQGVGCQLRGQNCYVEVSMGFPRSGTDNSLQPNRTSARNLSTLHVAESPITGRSDHKGSADHLSDYEKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPSSSSLIHCAGNVDCCEDPWTEINGARTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSADQLESDGPKLGSKRSRTGVTESLSTAANIPVQDTYMSDFGSVEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMFSSPDYGDVNSSPGGVIDVPDQILLPVGFPSFESFNPPPSTSVEECLNRSQDNLNNSMSLGPTNHTQMLYTREFDHIMKAEAMMTFAPEFGAVETPTCELSTTLFRSPYFPKCRKAESSNSSSNNYLYGAAPPSSPCTEGSEGKNGMSFNTKTGSGKHDSGTSLHSKHYYTFVESRKEKNDKNPVVCNDNSIAKSEGILSLSNIGSNAIVKPSPRKTAEGTHEPEHALLSAKTLLATDITCVMLQASVCRLRHILLSSGNLMPVGFSRSTGVSFFNQLPSEPSTTTDNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVGPSFSHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLDLVDPLSADVHASTVISLLQSDIKTALKSAFPNLEGPLSITDWCKGCNPLVDTGSIVEGVSVESTNNECRDSSEPMSPSQSSVGGSSSIKVSNIVDGAKGDETSQRRSGHDLCNTESEQQTCARLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMEIESSKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRSLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQLDRERKSSLHSQVVKALSGLATVDEASPSNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYCKARRISRGISSDFAQSAFSGRSHSVLTQLPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLNCDPSRTGDSFLHDEIRYMFEPLFILAEPGSLENGISVIGSPTSESSKALVDDSSGNYVQSTSTAGSVESASSADGSGSDPKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLIIQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGLSATSNGSSLQQPDMSLIPERTLPSSPSPLYSPHTKSTGFMKGNLGQPAARKQLMGGHSMVDNSRCLLHWAQSISFVAVSMDHTIQLVLPADSSTPSYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSILSVSLIDYYGGTNIPQEKVVRGINKQVGRSLSWEAKDFEIETHLVLESIAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADKELSKHSDKS 2062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03072 2062 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 108 2052 - -
Phco2g03072 2062 Pfam MID domain of medPIWI 1267 1382 IPR041285 -
Phco2g03072 2062 Pfam MID domain of medPIWI 1380 1503 IPR041285 -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 1561 1580 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 1623 1661 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 1164 1187 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 1562 1580 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 800 824 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 1623 1656 - -
Phco2g03072 2062 Pfam Mediator complex subunit 13 N-terminal 112 450 IPR021643 -
Phco2g03072 2062 Pfam Mediator complex subunit 13 C-terminal domain 1661 2041 IPR009401 GO:0003712|GO:0006357|GO:0016592
Phco2g03072 2062 MobiDBLite consensus disorder prediction 780 824 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 501 579 - -
Phco2g03072 2062 MobiDBLite consensus disorder prediction 501 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03072 Phco-Chr2 59102397 59132692 Dispersed