Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03063 ATGGTGATGAGTTTATCATTTTCTTCGGTGACAGTAAAGCCTTGTTCCATGAGTGTGAGCAATAAGAAAGCAGGTTGTTGTGGAAGAAGATTTAGTGTTACGAGGTCAGAAATAACCGTCGCTCCCAATCCCAAACAAGGAAGGCAGTTATCCAAGCAAGGATTTCCTCTAACGGATTTACATGTACAAGAGGTTGTTCACAGGCAGTCTCAAATCATTAGTCCTTGTAGCAAGCCTAAGCGAAAGTTTCATTCGACTTTTCTGAATGACGCCTATGAAAAGTGCAGAAATATCTGCGCCGAGTATGCCAAGACCTTCTATCTAGGAACCTTGCTTATGACGGAAGAAAGACAGAAAGCTATATGGGCAATTTATGTTTGGTGCAGGAGGACGGATGAGCTGGTTGATGGTCCTAACGCTGCCTATATGAGCTCTGGTGTTCTTGATAGGTGGGAAGATAGATTGCACGATATTTTCAATGGACATCCCTATGATATGCTTGATGCTGCTCTTACTGACACCCTCTCCAAGTTTCCGTTGGATATTAAGCCTTTCAGAGACATGATACAAGGAATGAGAATGGATACAAGGAAAACCCGCTACAACAATTTCCAAGAGCTTTATCTTTACTGTTACTATGTGGCGGGAACTGTTGGCTTAATGACCGTTCCAATAATGGGTATCGCACAGGAGTCGGTCATCCCTGTACAAAGTATATATGATGCTGCACTATATCTGGGTATAGGAAATCAACTCACCAACATTCTTAGAGATGTGGGAGAGGATGCATTAAGAGGTAGAGTGTACCTTCCCCAAGACGAACTGGCCCAGTTTGGATTATGTGAAAAGGATGTGTTTTCAAGAAATGTGAGTGAAAGATGGGGAAAGTTTATGAAACATCAAATTACGAGGGCAAGATTCTACTTCAACCGTGCAGAAGAAGGAGTTTCTCAGCTCGAAAAGGCCAGCCGTTGGCCGGTTTGGTCCTCATTAATATTGTATCGTAAGATCCTTGATGCAATTGAAGACAACGATTACGACAATTTGACTAAACGAGCTCATGTGGGTCGTGCTAAAAAATTGTTTACGTTGCCTCAAGCTTATACTAGATCTCTCTCAAATCGCAACACCAAATTTCGTCCTTTTTTGACAAGGCTTATTTAG 1164 0.421 MVMSLSFSSVTVKPCSMSVSNKKAGCCGRRFSVTRSEITVAPNPKQGRQLSKQGFPLTDLHVQEVVHRQSQIISPCSKPKRKFHSTFLNDAYEKCRNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNAAYMSSGVLDRWEDRLHDIFNGHPYDMLDAALTDTLSKFPLDIKPFRDMIQGMRMDTRKTRYNNFQELYLYCYYVAGTVGLMTVPIMGIAQESVIPVQSIYDAALYLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLCEKDVFSRNVSERWGKFMKHQITRARFYFNRAEEGVSQLEKASRWPVWSSLILYRKILDAIEDNDYDNLTKRAHVGRAKKLFTLPQAYTRSLSNRNTKFRPFLTRLI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03063 387 ProSitePatterns Squalene and phytoene synthases signature 2. 246 271 IPR019845 GO:0016765
Phco2g03063 387 CDD Trans_IPPS_HH 93 360 IPR033904 GO:0004311
Phco2g03063 387 SUPERFAMILY Terpenoid synthases 90 375 IPR008949 -
Phco2g03063 387 Gene3D Farnesyl Diphosphate Synthase 83 370 IPR008949 -
Phco2g03063 387 Pfam Squalene/phytoene synthase 102 357 IPR002060 GO:0009058
Phco2g03063 387 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 23 373 - -
Phco2g03063 387 SFLD Phytoene synthase like 89 372 IPR044843 GO:0004311
Phco2g03063 387 SFLD Squalene/Phytoene Synthase Like 89 372 IPR002060 GO:0009058
Phco2g03063 387 FunFam Phytoene synthase chloroplastic 83 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03063 Phco-Chr2 59056982 59058628 Transposed