Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g03062 | ATGTGCACGGTGTCAGGTTCTATCCTTCTGCTTCTGTGCTGCCCTTCTTCTTCGTCTTCTTCTTCTTCAATATCACTCCTTTGTTGTTATTCCAAAACCAAAACCAAAAAGAGAGTTGGCAATGGCATAAGCCATTTAAGTGTGGCCACCGCCACTTGTGCTATGGCTAAAGATGTGTGGAGCCGAACAGGTGGATCTGCATCCTCCTCTCCCATTCCCAGGGAACGTGGCAGTAGTAGGCAGCAACAAGGTACGTACCTGGACCGCAGTATGGATATGGAAGAGCTATTAGCGGCAATAGGAGAGACCCAGAACGAGGATGAACTGTATGCGGTGATGTCCCCCTACAGCGGTAGGCAGCTGTCTATGCGCTTCATGGTTTCGCTGCTCTCCCGCGAGCCCGATTGGCAACGCACCGTTGCCCTTCTCGATTGGATAAACGAAAAGGCCCTCTATTCCCCCTCCCTCTTCGCCTACAACGTCGTCCTCCGCAACGTCCTTCGGGCCAAGCAGTGGCACCTCGCCCACGGCCTGTTCGACGAAATGCGCCACAAGGGCCTTTCCCCCGATAGGTACACCTACTCCACCCTCATCACTTCTTTCGCCAAACACGGCTTGTTTGATTCTTCTCTCTTTTGGCTCCAGCAGATGGAGCAAGACAACGTTTCCGGCGACCTTGTCCTTTACAGTAATTTGATCGACCTTGCCCGCAAGTTGTGCGATTACTCCAAGGCCATTTCCATCTTCACCAGATTGAAATCTTCCGCCATTACCCCCGACCTCATTGCCTATAACTCCATGATCAATGTCTTTGGAAAAGCCAAGCTCTTCCGCGAGGCTCGCCTTCTTCTTCAAGAGATGGCCGACAATGCTGTTCAGCCCGATACCGTCAGCTATTCCACGCTTCTTGCCATCTACGTTGACAATCAAAAGTTTGTTGAAGCGCTTTCTCTGTTCTCTCAAATGAATGAAGCCAAATGCCCCCTTGATCTCACCACCTGTAACATCATGATTGATGTTTATGGCCAGCTTCACATGCCCAAGGAAGCGGATCGCCTCTTTTGGAGCATGAGGAAAATGGGGATTCAGCCCAATGTTGTTAGCTACAATACGCTCTTGAGGGTTTATGGAGATGCTGAGCTATTTGGGGAAGCCATCCATCTGTTTCGCTTGATGCAGAGTAAGGATGTACCGCAGAATGTTGTCACCTACAACACTATGATTAACATCTATGGCAAGACCCTTGAGCATGAGAAGGCTACCAATCTCGTTCAAGAAATGAAGAAAAGGGATATTGAACCCAATGCCATCACTTATTCGACTATAATATCCATTTGGGAAAAGGCAGGCAAACTGGACCGCGCAGCTATCTTGTTTCAAAAATTAAGGAGTTCAGGAGTTCGAATTGACGAGGTTCTTTACCAGACAATGATTGTAGCCTACGAGAGGGCAGGTTTAGTTGCTCATGCCAAGCGTCTGCTGCATGAGCTGAAGAGACCGGACAACATTCCCAGGGAGACTGCAATTATAATTCTTGCCAGAGCTGGTAGAATTGAAGAGGCTACCTGGGTTTTTCGTCAGGCTTTTGATGCTGGAGAAGTCAAAGATATATCTGTGTTTGGGTGCATGATTAATCTTTTCTCTAAGAACAAAAAGTATAGCAATGTAGTTGAAGTGTTTGAGAAGATGAGACAGGTGGGATATTTTCCTGATTCTGATGTTATTGCTCTCGTGCTGAATGCTTTTGGAAAGCTACGTGAATTTGATAAAGCAGATGGTTTATATAGACAGATGCACGAGGAAGGGTGTGTTTTTCCAGATGAAGTTCATTTCCAGATGCTGAGTCTATATGGTGCAAGAAAGGATTTCATGATGGTAGAGTCATTGTTTGAGAAGCTGGATTCCAATCCTAATGTCAATAAGAAGGAGTTGCATCTTGTTGTTGCTAGCATTTATGAGCGAGCAGATAGACTTAACGATGCTTCCCGAGTCATGAATAAGATGAACCAAAAAGCAATCAGAAGTCACGATCATACTTAG | 2040 | 0.4662 | MCTVSGSILLLLCCPSSSSSSSSISLLCCYSKTKTKKRVGNGISHLSVATATCAMAKDVWSRTGGSASSSPIPRERGSSRQQQGTYLDRSMDMEELLAAIGETQNEDELYAVMSPYSGRQLSMRFMVSLLSREPDWQRTVALLDWINEKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTYSTLITSFAKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFTRLKSSAITPDLIAYNSMINVFGKAKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSQMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGDAELFGEAIHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIIILARAGRIEEATWVFRQAFDAGEVKDISVFGCMINLFSKNKKYSNVVEVFEKMRQVGYFPDSDVIALVLNAFGKLREFDKADGLYRQMHEEGCVFPDEVHFQMLSLYGARKDFMMVESLFEKLDSNPNVNKKELHLVVASIYERADRLNDASRVMNKMNQKAIRSHDHT | 679 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g03062 | 679 | FunFam | pentatricopeptide repeat-containing protein At5g39980, chloroplastic | 346 | 503 | - | - | |
| Phco2g03062 | 679 | Gene3D | Tetratricopeptide repeat domain | 103 | 239 | IPR011990 | GO:0005515 | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 402 | 436 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 158 | 190 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 333 | 366 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 578 | 607 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 263 | 296 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 367 | 398 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 297 | 330 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 192 | 225 | IPR002885 | - | |
| Phco2g03062 | 679 | NCBIfam | pentatricopeptide repeat | 539 | 571 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 155 | 189 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat family | 330 | 375 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat family | 400 | 443 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat family | 259 | 303 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat family | 154 | 203 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 400 | 434 | IPR002885 | - | |
| Phco2g03062 | 679 | SUPERFAMILY | HCP-like | 213 | 429 | - | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 260 | 294 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat | 539 | 567 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat | 578 | 603 | IPR002885 | - | |
| Phco2g03062 | 679 | Pfam | PPR repeat | 472 | 499 | IPR002885 | - | |
| Phco2g03062 | 679 | PANTHER | OS03G0856100 PROTEIN | 484 | 673 | - | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 470 | 504 | IPR002885 | - | |
| Phco2g03062 | 679 | Gene3D | Tetratricopeptide repeat domain | 502 | 679 | IPR011990 | GO:0005515 | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 365 | 399 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 330 | 364 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 295 | 329 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 536 | 570 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 190 | 224 | IPR002885 | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 571 | 605 | IPR002885 | - | |
| Phco2g03062 | 679 | Gene3D | Tetratricopeptide repeat domain | 429 | 501 | IPR011990 | GO:0005515 | |
| Phco2g03062 | 679 | Gene3D | Tetratricopeptide repeat domain | 240 | 358 | IPR011990 | GO:0005515 | |
| Phco2g03062 | 679 | Gene3D | Tetratricopeptide repeat domain | 359 | 428 | IPR011990 | GO:0005515 | |
| Phco2g03062 | 679 | MobiDBLite | consensus disorder prediction | 64 | 85 | - | - | |
| Phco2g03062 | 679 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 435 | 469 | IPR002885 | - |