Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03059 ATGAGTGCAGAGATTGATTCAACTTCCGCTCCTGAACCTCACAAAATGTCTGGAGCTTCATCTGCAACAACTACTAGTGGCCAAAAGCTCTCTATATTTGCTTCCAAATCAGGATTTGTCATCCCTAAAAACAAATTGTCGGGGTCACTGGTCCCTATTTTCCGAGGGGCTACAAAACACGGGATCACTGGAGCCATCAATGAAGAAAGTTCAAAACAAACTGAGAGGAAATCAAAATGGGGACCTGATCTTACACAGGATGCAACTGTCAGGAGGGGAAAGGCTTTAGCTCTGCAGATTCGAGTGGATCAAATCACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTGCCATTAGGAGCTGAGAATTCTGATCAAATCAAATATGGCTCTCAAATTAACAACAAGAAGTCAGGAATGCTCGAACTTGAAAAGCGGGAAGCCATAGGTGAAATACTAAAATTAGATCCCAGTTACAAACCTCCACGTGGTTTTAAACCATTGTTAAAAGAAGCCAGCATTCCTTTGCCTGTACAAGAATATCCTGGGTGCAATTTTGTTGGTCTAATATATGGGCCTGAAGGTGATAATCAGAAACAACTAGAAAAGGAAACTGCTGCAAAGATAAAAATTCATGGAACCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCTGGGACGGATATCCAGTGCAGTTACAAGGAGATGTATGTTAACATATCAGCTGATAGTTTTGAAAAAGTGGATGCAGCAATGTCAATAATTGAACTGCTAATTACCTCTGTAACTGGGAATTTAGGTGCTGGCTCTACACCCTCTATATCAGTTCATAGGGACAGCACTGATATTCTGTGTCAAAGCCAAGAAGGTCACCCTTCTCTTGCAGATTCTGTTTCTCTGGAAAACCAGGCTGTTTTGCAACCAGTAGCTGTTACCCAAATGCATGAAGATAACTTCCAATACTCTACACCATGGTTTTCAGCTGTTCCATCTAATACCCCCACATTTGCTTCATCTGGCACTGTAGCCTCCCCAAACCCATTAGGTCTTGCTAGAACTCCCCATTTTCCATCACAAACTTCAAACTCGGTTCCTACTTTTGGTGCTCAACCTGGATTTCAACCAATTATTCCAAATCAACATGTTTCTGTGCAAGCACCACCACCAAGACAGATTTTACACTATCTACATTTGACTCAGGCGAGTCCTCTGGGTTACGTTGGTCCCCCAAGAAATGCTTCTATAATATCTGTACAGAATTTGTCAACTCCGACAAATGCTTCACATTCATTTCCTGTTACTTTAAGCCAACCAACGCCAATAGGACAACTGCAGACAACAGTGTCTTCATTGCATCTACCCATATCTGGTGTATCCCCATTGCCCATACCTAACCAGCCCATCACCCATCTTGGGGTCCCTTCTGGCCAGAATGAAGCCCTTGTCGCTGTTAAAACATCTATTGGTCCCAGCAATATGGGTTCAATGGTTCCACCTGGAAGACCTGCCTCTCTACAACAACAACCGGATGTTGCATTTATGCCACCACAGTCAAATATGTCAATGATGCCACGATCTGCCTCCTTTCCTCCACATCAAGTAGGAATATCCCCCGCACCACTATCTTCTTTGAGACCTATGTCTGTACCAATACCTGCACCTAAACATTCATCTGTAAACCATTTATCAGGACCAGTTTCATTTCCTTCGTCTGGAATATCCTCTTCTTTTCCTTTGCCTCAGCAAACAGGAATACCTAATTCTGCTTCTGGAATTGCTCCTTTTCACACCCATGTAAAACCATCTGTCTTGGTGCCTTCAAAATCTGGAAATTTTACTTTTCAATCACATCCCCCCAATGCAGACTACAGTCAAGTGGTTTCTGGACCAAACAGTCAAGCAGGTGCTACGCAAGAGCCACCTCCTGGTCTACGGCCTCCGCCATTTGGGTTTGGCGTGCCTGATCAGCCTCTTCAAATCTTTCCTAGGACACAATTCCCTGCTCAAGTGGATCAAACCATTTCCTTCGGGGGAAGATCGGGTTCCATATCGAACTCAATTCCACCACCCAGACACACTGCATTTCCATATGGGGGTCAACCTGCACCTAGATCTCCTGTCCCACAAATGGGTATGAAGAACTTCCTTCCTGCTCCGCAAAGGCCAAACTTGACCGGTGCTGTTGCCCAAAGAGGCATGCCTATCCGACAAAGCTATGCTGTTCAGATGGCACGGCCAGATATTTCAATGCCCCTGAATCACAAGTTTGCGAACAATACCCTCATGGCTTCTGGTAAGCTACCATATTCTGCGGACCAAATTTATGACCCCTTTTCACCCACTTCTGCACCTCCACAACAGAAAGGTAATCCTGGGCACTGA 2400 0.4442 MSAEIDSTSAPEPHKMSGASSATTTSGQKLSIFASKSGFVIPKNKLSGSLVPIFRGATKHGITGAINEESSKQTERKSKWGPDLTQDATVRRGKALALQIRVDQITKQLESEKLEVGDTQNLPLGAENSDQIKYGSQINNKKSGMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGCNFVGLIYGPEGDNQKQLEKETAAKIKIHGTKADTGEKGEIKPGTDIQCSYKEMYVNISADSFEKVDAAMSIIELLITSVTGNLGAGSTPSISVHRDSTDILCQSQEGHPSLADSVSLENQAVLQPVAVTQMHEDNFQYSTPWFSAVPSNTPTFASSGTVASPNPLGLARTPHFPSQTSNSVPTFGAQPGFQPIIPNQHVSVQAPPPRQILHYLHLTQASPLGYVGPPRNASIISVQNLSTPTNASHSFPVTLSQPTPIGQLQTTVSSLHLPISGVSPLPIPNQPITHLGVPSGQNEALVAVKTSIGPSNMGSMVPPGRPASLQQQPDVAFMPPQSNMSMMPRSASFPPHQVGISPAPLSSLRPMSVPIPAPKHSSVNHLSGPVSFPSSGISSSFPLPQQTGIPNSASGIAPFHTHVKPSVLVPSKSGNFTFQSHPPNADYSQVVSGPNSQAGATQEPPPGLRPPPFGFGVPDQPLQIFPRTQFPAQVDQTISFGGRSGSISNSIPPPRHTAFPYGGQPAPRSPVPQMGMKNFLPAPQRPNLTGAVAQRGMPIRQSYAVQMARPDISMPLNHKFANNTLMASGKLPYSADQIYDPFSPTSAPPQQKGNPGH 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03059 799 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 178 270 IPR036612 GO:0003723
Phco2g03059 799 Gene3D K Homology domain, type 1 170 294 IPR036612 GO:0003723
Phco2g03059 799 SMART kh_6 173 266 IPR004087 GO:0003676
Phco2g03059 799 MobiDBLite consensus disorder prediction 1 27 - -
Phco2g03059 799 MobiDBLite consensus disorder prediction 616 657 - -
Phco2g03059 799 ProSiteProfiles Type-1 KH domain profile. 190 261 - -
Phco2g03059 799 MobiDBLite consensus disorder prediction 781 799 - -
Phco2g03059 799 MobiDBLite consensus disorder prediction 778 799 - -
Phco2g03059 799 FunFam Splicing factor-like protein 1 isoform A 175 278 - -
Phco2g03059 799 PANTHER RNA-BINDING PROTEIN RELATED 29 635 IPR045071 -
Phco2g03059 799 MobiDBLite consensus disorder prediction 616 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03059 Phco-Chr2 59037581 59042177 Dispersed