Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g03038 ATGAAGGACCTATTTTTTGTTCTTCTAATATTTGTTAGAGTTATTGCTTCAACTAGCTCCTGTGATTCAAAAACTCTCACCTTCAACGTTGTCAGCTACGGTGCCACGGGGAATGGCCACACTGATGATACACAGGCTTTCGTAAAAGCATGGAAGGACGTGTGTGGTGCAACTCGGAATAACGCAAAACTTCTCATACCCAACAACAAAATATTCCTGTTGCAACCTCTGTCGTTTAAGGGCCCTTGCAATCCAGCAACCATTGAAGTTCTGCTGGAGGGGACTGTGATTGCCCCAGAAAGCGTTGGGGTTTGGAAATTTTTGGATGAGAGAAGGAAATGGATGGAATTCTCGGACATTTGTGGTCTTGTAATAAAGGGAGGAGGGCAGATCGATGGGCAAGGTGCTGCGTGGTGGAACTCCGTTGATGTCTCCAACAGGCCCACTGCTCTTCATTTCCACAACTGTAAAGATGTAACACTTAGTTCGATCCATCACAAGAACAGCCCCAGAAATCATATAAGCATAGATACGTGCAATAGCCTAGAGATATCCCAGATTCACATCATTGCACCAGAGGAAAGTCCGAACACCGACGGGATAGATATCTCCGGATCATCCAACATCTTTATACACAGTTCCACCATTCAAACTGGTGATGACTGCATTGCCATAAACTCGGGTACTTCTTTGGTTAATATAAGTGATATTTTCTGTGGACCTGGCCACGGCATCAGCATTGGGAGCCTGGGACGAAATGGAGAGGATGCGAGAGTTGAAGAGATATACGTGAGGAATTGCACCTTCACCGGAACATCTAACGGAGTGAGAGTGAAGACATGGAGGGGAGGAGAGGGTTATGCGAGGAAGATAAGATTTGAAGATATTAAAGTTGTCGGAGTGAAGCAGCCGGTGATTATCAACCAGGATTACTCGGTAGACATGGAAAGTGAGAGAAGTGCAGTGAAAATAAGTGAGGTGAGTTACCGGAACGTGAAGGGAACATGTAGCAGTGACAGTGCAGTGGAGCTGAGTTGTGATCCGAATGTAGGGTGCAGCGAGATTGTAATGGATGATATTTCCATAAGCAAAGAAGATGGGAGTGTAGCAAACGCATCATGCACAGCTGCACAGGGGACCTGCTCTCACTGCAATCCAATCGTCCCTTGTCTTTCTACTTTTAAACCTCTTTAA 1194 0.4556 MKDLFFVLLIFVRVIASTSSCDSKTLTFNVVSYGATGNGHTDDTQAFVKAWKDVCGATRNNAKLLIPNNKIFLLQPLSFKGPCNPATIEVLLEGTVIAPESVGVWKFLDERRKWMEFSDICGLVIKGGGQIDGQGAAWWNSVDVSNRPTALHFHNCKDVTLSSIHHKNSPRNHISIDTCNSLEISQIHIIAPEESPNTDGIDISGSSNIFIHSSTIQTGDDCIAINSGTSLVNISDIFCGPGHGISIGSLGRNGEDARVEEIYVRNCTFTGTSNGVRVKTWRGGEGYARKIRFEDIKVVGVKQPVIINQDYSVDMESERSAVKISEVSYRNVKGTCSSDSAVELSCDPNVGCSEIVMDDISISKEDGSVANASCTAAQGTCSHCNPIVPCLSTFKPL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g03038 397 Pfam Glycosyl hydrolases family 28 59 379 IPR000743 GO:0004650|GO:0005975
Phco2g03038 397 SUPERFAMILY Pectin lyase-like 20 391 IPR011050 -
Phco2g03038 397 SMART pbh1 229 249 IPR006626 -
Phco2g03038 397 SMART pbh1 206 227 IPR006626 -
Phco2g03038 397 SMART pbh1 179 205 IPR006626 -
Phco2g03038 397 SMART pbh1 259 280 IPR006626 -
Phco2g03038 397 ProSitePatterns Polygalacturonase active site. 236 249 IPR000743 GO:0004650|GO:0005975
Phco2g03038 397 Gene3D - 14 390 IPR012334 -
Phco2g03038 397 PANTHER - 25 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g03038 Phco-Chr2 58931339 58933125 Dispersed/Transposed