Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02974 ATGGTTACTATGGCGGAGGAAGAAGAGAACGGAGTGTCGATTCAACTCGAATTCCCGAAGGGTCGGGTTAAGAAGATTATGATGCTGGACAAGGATGTGAAGAGAGTGAATTCCGAAGCGTTGTTCCTGGTGTCGCGCTCCACGGAGTTATTCCTCCAATTTCTGGCTGAAAAATCTGCGAACGTTTCGATTGAAAAGAAACGGAAGACTGTGAATCTGGAACACGTGAGAATTGCCGTTAAGAGGCACCAGCCCACCAGGGATTTTCTCCTCGATGATCTTCCGCCGCCGTCTCGGCCCGCCAAGCCCGATGAGCCCCCTCAGCCCGTTTCTCGGGCCAAACTTGATGCCCCTCCGCCTGGTACTCGTCGCATCGATCAATTCTTCCGAAAGCCAGAGCCTCAAAATCCAGCCCAAGCCCAATCGCCCGAAATTCCTGCCCAAGCTCAATCGCCCGAAATTCCTGCCCAAGCTCAATCGCCCGAAATTCCTGCCCAAGCTCAGTCGCCCGAAATTCCTGCCCAAGCTCAGTCGCCCGAAATTCCTGCCCAAGCTCAGTCGCCCGAAATTCCTGCCCAAGCTCAGTCGCCCGAAATTCCTGCTCAAGCCCAGTCGCCTGAAATTCCTGCTCAAGCTCAGTCGCCAGTACCCGTAGATGAGTCATAG 666 0.542 MVTMAEEEENGVSIQLEFPKGRVKKIMMLDKDVKRVNSEALFLVSRSTELFLQFLAEKSANVSIEKKRKTVNLEHVRIAVKRHQPTRDFLLDDLPPPSRPAKPDEPPQPVSRAKLDAPPPGTRRIDQFFRKPEPQNPAQAQSPEIPAQAQSPEIPAQAQSPEIPAQAQSPEIPAQAQSPEIPAQAQSPEIPAQAQSPEIPAQAQSPEIPAQAQSPVPVDES 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02974 221 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 17 80 IPR003958 -
Phco2g02974 221 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 141 - -
Phco2g02974 221 Gene3D Histone, subunit A 1 95 IPR009072 GO:0046982
Phco2g02974 221 MobiDBLite consensus disorder prediction 134 211 - -
Phco2g02974 221 FunFam Nuclear factor Y, subunit C13 4 95 - -
Phco2g02974 221 SUPERFAMILY Histone-fold 15 96 IPR009072 GO:0046982
Phco2g02974 221 MobiDBLite consensus disorder prediction 87 221 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco2g02974 CBFD_NFYB_HMF 1.2e-17 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02974 2 58570489 58571154 Phco2g02974 2 58570489 58571154 ECH