Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02954 ATGAGTCATTCCGAGGAAAACAGTGTTGATGTTGTTGCTGCTGCTGCTAGACAGAAGAAAATTGACGATTGGCTTCCAGTGACTGCTTCGCGAAATGGGAAATGGTGGTATTCAACTTTCCATAATCTCACAGCCATGGTTGGTGCAGGTGTTCTCACCCTTCCCTTTGCCATGTCAAATATGGGCTGGGGTCCTGGTGCTACTGTGCTTTTCTTGTCATGGATTATCACCCTTTACACCCTGTGGCAAATGGTGGAGATGCACGAAATGGTGCCTGGGAAGAGATTCGACAGGTACCACGAGTTGGGTCAGCATGCCTTTGGAGACAAGTTGGGTCTCTGGATTGTGATTCCTCAACAGATCATTGTTGAAATTGGAACATGTATCGTGTATACGGTCACTGGGGGCAAGTCATTGAAGAAAGTCCATGATACCATTTGCCCCGATTGCAAAGATATTAGAACCTCTTATTGGATTGTTATCTTTGCTTCTGTCAACTTGGTTCTTGCACAATGCCCCAACTTCAACTCCATCTCTGTTATCTCTTTTGGTGCAGCTGCCATGTCTTTGATGTACTCAACCATCTCTTGGTGTGCTGCTATAAACAAGGGCACTGAACCGGATGTGAATTATGGGCTCCGAGCCACCAATTCCACTGATGCAGTGTTCAACTTTCTTTCTGCCTTGGGCGATGTAGCATTTGCCTACGCAGGCCACAATGTGGTTTTGGAAATTCAAGCAACCATGCCTTCAACCCCAGAGATACCTTCCAAGAAACCCATGTGGAGAGGTGTTATTTTGGCATACATAGGAGTTGCATTCTGCTACTTACCCGTTGCTTTCATTGGGTACTATATCTTTGGAAACTCAGTTGATGATAATATCCTCATCACACTGCAACGCCCCTCTTGGCTCATTGCCACAGCTAACTTTTTTGTCTTTCTTCATGTTGTTGGAGGCTACCAAGTGTTTGCTATGCCAGTGTTTGATATGATCGAAACCTACATGGTTACCAAGTTAAATTTTTCACCTTCTACTGTTCTACGAGTGACAACTCGAAGCATATATGTTGCACTCACTATGCTAATTGCCATATGTATCCCGTTCTTTGGCTCTCTACTTGGATTTCTTGGAGGCTTTGCCTCTGCCCCAACTTCATATTTTTTGCCCTGTATCATATGGCTCAGGCTCATTAAGCCCAAGAGATATGGCTTGTCTTGGACAATCAACTGGATCTGCATTTTTCTTGGGGTATTGTTGATGATACTATCTCCTATTGCTGCTATGAGAAATATCATCATGTCAGCCAAAGACTACAATGAGAGAAACCCTAGAGAGAGAGAGCGAGCAATGGAAGAGGAAATCAAATCCGAATTCAAAAGAAGCGGTTTCGATATCGAAGACGAAGAAGAAATTCTCAGCAAATGTGTCACTTTCTGCATCAACTACAGTCTTACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTCATTACCTCAATAGACAGCTGAATGAACCAATAGTAGAGAGTGCTGAAATTGACGGCTTTCTGTTGCATCTACAAAATCAGAAGAAAGAGGACATTATAAAGGAAAAGGAAGAATCTGGCTTGCATATGTACACTATCGGAGATGTAGAAATGCTCTTAAATAATGATGATGATACAAAGGACAATACTCCTGGAACTCCAATAAATCACCATCATGATATTTTTTCTCCAACTGACACAACATCTTTAATGTATGAGAATGTTTTATCTTCTGGGAAAGCATCGAAATCAAAACTAATTACACCCTTTTCAAAGCGAACGGCAAGGTTTGCAGTGAAATTTAGTATCAACACTCTCCCTAGTGTAGAGAATGGGAAGCAAGAACTTAATCACGAGGATACTGAGAATGATGAAGATGATGTTGTCAGAAGAGTTCCACAACGTGAAAGGTGTTCATTGGTCATTCATGGATCAGGACTCAAACCAGGTTGTAGATTCATGTATGATAGAACAGAGGATAGGCTTAATGCAATAGAAAACCGAATTAGGAAACATACAAGGGCATTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCCACATCTGCTTCACAGAGGAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGCAGAAGGCCGTTTAAATGAGAAGTCTGTCATGCTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTTCGCCTTGACTTGCAACGTTTAAACCATTATTCAATTTTTCCTGGCCAGGTAGTTGGTATTGGAGGACATAATCCTAGTGGGCATTGCTTCATTGCATCTAAATTGGTGGATTCTATACCTACGTCTGTTGCTGATGAGAATTTGAATCCTTCAAAGAAGCAAGCTATTGATAAGGAGAATCAGTCTACTGATACGCTTTGTAAACAGAGAGAGTTATCAATGATTATTGCGGCTGGTCCCTTTACTACAGCAGACAATTTGTTGTTTGAGCCTCTTACAGAACTGCTGCAATATGCAAAACGAAGACCACCACAGTTGCTTGTATTGCTGGGACCATTTGTGGACTCTGAGCACCCAGATCTTAAGAAAGGAACTGTAGACAGGACTTTTGATGAAATATTTCATTTTGAAATCCTGAGGAAGTTGGAAGATTATGTAGAACATGTGGGTTCTGGAACACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAACCATGATTTTGTGTTTCCTCAGCCTGCATTGGAAATCAATTTATCTGATTTCAAATCTCAGATAGTCAGTCTCGCTAATCCTGGAATCTTTGAGGCCAATGAGGTTAAGGTTGGTTGCTGCACCGTGGATGTTCTCAAGCAAACCAGTGGAGAGGAGATATCGCGAACTGCAGCAGATGGAAAACCCATGGATCGCATGAGTAGACTTGCAAACCATATTCTCAACCAACAAAGCTTCTATCCACTTTACCCACCCGCAGAAAGTGTTCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAGCTTTCATTGGTTCCCGACATACTTATCCTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGCAGCGAAAGTGAAGGCATAAACAACTCGAAATGCATAGCTGTAAATCCGGGTAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTCGAGCTAGATTATGGTGGAGGTTCGGACCAAATTAACGCTTCAATTGTTGGCATATGA 3222 0.4261 MSHSEENSVDVVAAAARQKKIDDWLPVTASRNGKWWYSTFHNLTAMVGAGVLTLPFAMSNMGWGPGATVLFLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGDKLGLWIVIPQQIIVEIGTCIVYTVTGGKSLKKVHDTICPDCKDIRTSYWIVIFASVNLVLAQCPNFNSISVISFGAAAMSLMYSTISWCAAINKGTEPDVNYGLRATNSTDAVFNFLSALGDVAFAYAGHNVVLEIQATMPSTPEIPSKKPMWRGVILAYIGVAFCYLPVAFIGYYIFGNSVDDNILITLQRPSWLIATANFFVFLHVVGGYQVFAMPVFDMIETYMVTKLNFSPSTVLRVTTRSIYVALTMLIAICIPFFGSLLGFLGGFASAPTSYFLPCIIWLRLIKPKRYGLSWTINWICIFLGVLLMILSPIAAMRNIIMSAKDYNERNPRERERAMEEEIKSEFKRSGFDIEDEEEILSKCVTFCINYSLTPSDLVSSWEVHYLNRQLNEPIVESAEIDGFLLHLQNQKKEDIIKEKEESGLHMYTIGDVEMLLNNDDDTKDNTPGTPINHHHDIFSPTDTTSLMYENVLSSGKASKSKLITPFSKRTARFAVKFSINTLPSVENGKQELNHEDTENDEDDVVRRVPQRERCSLVIHGSGLKPGCRFMYDRTEDRLNAIENRIRKHTRAFVASGLYEEPTDPTSASQRSIFAVGMICCDAEGRLNEKSVMLQSSIEHSGGECVRLDLQRLNHYSIFPGQVVGIGGHNPSGHCFIASKLVDSIPTSVADENLNPSKKQAIDKENQSTDTLCKQRELSMIIAAGPFTTADNLLFEPLTELLQYAKRRPPQLLVLLGPFVDSEHPDLKKGTVDRTFDEIFHFEILRKLEDYVEHVGSGTRVLLVPSIRDANHDFVFPQPALEINLSDFKSQIVSLANPGIFEANEVKVGCCTVDVLKQTSGEEISRTAADGKPMDRMSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDILILPSDIKYFVKVLSSESEGINNSKCIAVNPGRLAKGEGGGTFVELDYGGGSDQINASIVGI 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02954 1073 Gene3D - 963 1068 - -
Phco2g02954 1073 Gene3D - 791 956 - -
Phco2g02954 1073 FunFam Lysine histidine transporter 1 28 438 - -
Phco2g02954 1073 FunFam DNA polymerase alpha subunit B 450 526 - -
Phco2g02954 1073 Coils Coil 664 684 - -
Phco2g02954 1073 Gene3D - 449 516 IPR043034 -
Phco2g02954 1073 FunFam DNA polymerase alpha subunit B 793 958 - -
Phco2g02954 1073 Pfam DNA polymerase alpha/epsilon subunit B 813 1023 IPR007185 GO:0003677|GO:0006260
Phco2g02954 1073 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 451 1059 IPR016722 -
Phco2g02954 1073 Pfam Transmembrane amino acid transporter protein 32 428 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02954 Phco-Chr2 58440858 58450122 Dispersed/Wgd