Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02933 ATGGAATGCTGTATAATCTCCAGGCTCAGGGTCCAACCCATATGGTTCGTGCTGCTCTTTCTTGTCGGATTGTTGACGATTCTGAAACTAGCTTTCGTTCTTATCAGATGGGTCTACGTCAATTTCCTCAGACCTCCCAAAAACCTTAGAAAGTACGGATCTTGGGCTGTCGTCACTGGACCCACTGACGGCATTGGAAAGAGCTTCGCTTTCGAGCTTGCCCGTAAAGGCCTCAACCTCGTACTCGTCGGTCGGAACCCCAACAAGCTCAAAGACGTGTCGGATTCGATCGCCGCCAAGTTCGGAAAAACAGAGGTCAGGACTGTGGTGGTCGATTTCTCGGGGGATCTGGACGAGGGTGTGGCCAAGATTGGGGAAGCAATTGAAGGGTTGGACGTTGGAGTGCTGGTTAACAATGTGGGAGTTTCTTACCCTTACGCCAGGTTCTTCCATGAAGTGGACGAGGGGCTTCTCAACAACCTTATTCAGGTTAACGTTGTTGGAACCACCAAGGTCACGCAAGCTGTTCTGCCGGGGATGCTGAAGAGAAAGAGAGGAGCGATTGTTAACATTGGTTCTGGTGCCGCTATCGTGATTCCTTCCGATCCCCTTTATGCTGTTTATGCCGCCACCAAAGCGTACATCGATCAGTTTTCCAGATGTCTCTATGTTGAATACAAGAAGAGTGGAATTGACGTTCAGTGTCAGGTTCCATTATATGTGGCAACCAAGATGGCATCAATCAGGAAATCTTCATTCTTTGTTCCATCAACAGATGGCTATGCCAGAGCTGGTGTGCGATGGATAGGCTACGAGCCTCGATGCACGCCATACTGGCCACATACCCTTCTCTGGGCTGTGGCCTGCTCATTGCCTGAATTTGTTGTTGATGCTTGGCGCCTGTGGTTCTGCTTGGGTATTCGAAAGAGGGGACAGCGCAAAGATTCCACGAAGAAGGAATAG 963 0.4984 MECCIISRLRVQPIWFVLLFLVGLLTILKLAFVLIRWVYVNFLRPPKNLRKYGSWAVVTGPTDGIGKSFAFELARKGLNLVLVGRNPNKLKDVSDSIAAKFGKTEVRTVVVDFSGDLDEGVAKIGEAIEGLDVGVLVNNVGVSYPYARFFHEVDEGLLNNLIQVNVVGTTKVTQAVLPGMLKRKRGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRKSSFFVPSTDGYARAGVRWIGYEPRCTPYWPHTLLWAVACSLPEFVVDAWRLWFCLGIRKRGQRKDSTKKE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02933 320 Pfam short chain dehydrogenase 55 247 IPR002347 -
Phco2g02933 320 PIRSF 11-beta-HSD1 4 314 - -
Phco2g02933 320 FunFam very-long-chain 3-oxoacyl-CoA reductase 1 49 277 - -
Phco2g02933 320 PANTHER RH59310P 14 319 - -
Phco2g02933 320 PRINTS Glucose/ribitol dehydrogenase family signature 131 142 IPR002347 -
Phco2g02933 320 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Phco2g02933 320 PRINTS Glucose/ribitol dehydrogenase family signature 55 72 IPR002347 -
Phco2g02933 320 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Phco2g02933 320 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Phco2g02933 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 311 IPR036291 -
Phco2g02933 320 CDD 17beta-HSD1_like_SDR_c 53 295 - -
Phco2g02933 320 Gene3D - 49 266 - -
Phco2g02933 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Phco2g02933 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 142 IPR002347 -
Phco2g02933 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02933 Phco-Chr2 58291413 58293436 Tandem