Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g02911 | ATGGGTCTGTCGAATTTCCCAAGTGCATCTGAAGGGGTGCTTCCTGTGCTTGTGATAAACACGGTTCTCTCGGTGGGTGTGTTGAAGAACATGTTTAGATCCATGCTGCAAGTTGTTGGTGGCAATGGAAATGGAAGTTGGAGGAGGAACAGTGAACATGAGTGTCGTGAAAGTTCAGGCGAAAGGAGGGTGTCAATAACTCAGTACAAGGCATTGTGGAAGAAGATAGGAAGAAGTAGTGGTGTGGCCATGGTGGAGTGCTGCGTTTGTTTGTGTCGTTTTGAAGGCAACCAAGAGGTTAGCGAGTTGCCTTGCAAACATTACTTCCACAGAGGCTGCTTGGACAAATGGTTTGATAACAAACACATCACATGCCCCTTGTGTCGTTCCATGGATTAG | 399 | 0.4687 | MGLSNFPSASEGVLPVLVINTVLSVGVLKNMFRSMLQVVGGNGNGSWRRNSEHECRESSGERRVSITQYKALWKKIGRSSGVAMVECCVCLCRFEGNQEVSELPCKHYFHRGCLDKWFDNKHITCPLCRSMD | 132 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g02911 | 132 | SMART | ring_2 | 87 | 128 | IPR001841 | - | |
| Phco2g02911 | 132 | SMART | ringv_2 | 86 | 129 | IPR011016 | GO:0008270 | |
| Phco2g02911 | 132 | SUPERFAMILY | RING/U-box | 86 | 130 | - | - | |
| Phco2g02911 | 132 | CDD | RING-H2_PA-TM-RING | 86 | 129 | - | - | |
| Phco2g02911 | 132 | Pfam | Ring finger domain | 86 | 129 | IPR001841 | - | |
| Phco2g02911 | 132 | ProSiteProfiles | Zinc finger RING-type profile. | 87 | 129 | IPR001841 | - | |
| Phco2g02911 | 132 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 132 | IPR013083 | - | |
| Phco2g02911 | 132 | PANTHER | - | 1 | 131 | IPR044249 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco2g02911 | Phco-Chr2 | 58155736 | 58156134 | Dispersed |