Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02884 ATGTTTACTTTTTGTCTTGTACATGATTCCACTTCCGTTCCTGGTTTCATTTGTTCTCTCTTTTTGTGGTTGACCCCTGTCTTGGTTGATGAGAGTGGAAAAATGGATTTGGCATCTGTTCTTTTGCTATTGACTAGTGTGTGCTCGTCGGCGTTGGCTGGGCTTGATTCACAAGAAGATGCGCTGTATGCGCTGAAGTTATCATTGAATGCTTCTCCCAGCCAGCTTACAAACTGGAACAAAAATCTAGTTGACCCTTGTACTTGGTCCAATGTTGAATGTGACCAGAATAACAACGTTATTCGAGTTTCACTAGAATTTATGGGATTCACAGGATCGTTGACACCAATAATAGCATCTCTAAAAAGTCTTGAAACTCTTTCTTTGCAAGGGAATAACATCACTGGTGACATACCAAAAGAATTTGGAAATCTTACAAGCTTGGTCAGATTGGACTTGGAAAACAACAAATTAACTGGTGAAATACCCTATTCCCTTGGTAATCTTAGAAAGCTTCAATTCTTGACATTGAGTCAAAACAATCTTAATGGAACTATTCCAGCATCACTTGCCAGTCTCCCGAACTTGCTCACTGTTATGCTAGATTCAAATGAACTTAGTGGGAAGATTCCGGAGCAGTTATTCAGCATTCCTACATACAATTTCACTGGAAATAATTTGAACTGTGGAGTGAGTTATCATCATCTGTGCGCATCTGATAATGCAGATCAAGGTTCGTCGCATAAAACAAAAGTGGGCCTCATAGTTGGAATAGTTACGGGTTTAGTTGTTATTCTTTTTCTTGGTTGTCTGCTGTTCTTCTGGTACAAGGGGTGCAAGCGTGAAATTTTTGTAGATGTTCCAGGTGAGGTTGATCGCCGAATTACATTTGGTCAAATAAAAAGATTTTCCTGGAAAGAACTACAGATAGCTACAGACAACTTCAGCGAGAAAAATATTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTATTCTAGCTGATGGTACAAAAGTTGCTGTTAAAAGGTTAACTGATTATGAGAGTCCTGCGGGTGATGCCGCTTTCCAGCGTGAAGTCGAGTTGATAAGTGTAGCTGTCCATAGGAACCTGTTACGGCTCATTGGTTTTTGTACTACTCCAACTGAACGTCTCTTAGTTTATCCCTTCATGCAAAATTTAAGTGTTGCCTATCGTCTACGAGAACTCAGACCTGGGGACCCCGTTTTGGATTGGCCTACTAGAAAACGAGTAGCTCTAGGAACAGCCCGTGGCCTAGAATATCTTCACGAGCAGTGTAATCCTAGGATTATTCATAGGGATGTGAAGGCAGCTAATATATTACTAGATGGAGATTTCGAAGCAGTTGTTGGTGACTTTGGTTTGGCAAAATTAGTTGATATTCGAAATACTACTGTGACAACTCAAGTTCGTGGGACAATGGGTCATATAGCTCCAGAATACTTGTCCACAGGAAAATCTTCAGAAAGGACTGATATTTTTGGTTATGGGATTATGCTTTTGGAACTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGAGGAGGATGACGTGTTATTGCTTGACCATGTTAAGAAACTGCAACGGGAGAAAAGACTAGATGTTATTGTGGACTGCAACCTGATGAAAAATTACATAATAGGAGAGGTTGAAATGATTGTACAAATTGCATTACTCTGCACACAAGCATCGCCGGAGGATCGTCCAGCAATGTCAGAAGTTGTAAGAATGTTAGAGGGAGAAGGGCTAGCTGAAAGATGGGAAGAATGGCAGCATGTGCAGGTTGCTACGAGGCAAGATTACGAGAGACTACAGAGAAGAATGAACTGGGGAGAAGATTCAATTAATAACCAAGATGCCATTGAGTTGTCAGGTGGAAGATGA 1917 0.4074 MFTFCLVHDSTSVPGFICSLFLWLTPVLVDESGKMDLASVLLLLTSVCSSALAGLDSQEDALYALKLSLNASPSQLTNWNKNLVDPCTWSNVECDQNNNVIRVSLEFMGFTGSLTPIIASLKSLETLSLQGNNITGDIPKEFGNLTSLVRLDLENNKLTGEIPYSLGNLRKLQFLTLSQNNLNGTIPASLASLPNLLTVMLDSNELSGKIPEQLFSIPTYNFTGNNLNCGVSYHHLCASDNADQGSSHKTKVGLIVGIVTGLVVILFLGCLLFFWYKGCKREIFVDVPGEVDRRITFGQIKRFSWKELQIATDNFSEKNILGQGGFGKVYKGILADGTKVAVKRLTDYESPAGDAAFQREVELISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELRPGDPVLDWPTRKRVALGTARGLEYLHEQCNPRIIHRDVKAANILLDGDFEAVVGDFGLAKLVDIRNTTVTTQVRGTMGHIAPEYLSTGKSSERTDIFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLDVIVDCNLMKNYIIGEVEMIVQIALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVQVATRQDYERLQRRMNWGEDSINNQDAIELSGGR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02884 638 Gene3D Phosphorylase Kinase; domain 1 284 391 - -
Phco2g02884 638 Pfam Leucine rich repeat N-terminal domain 56 95 IPR013210 -
Phco2g02884 638 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Phco2g02884 638 ProSiteProfiles Protein kinase domain profile. 315 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02884 638 SUPERFAMILY L domain-like 57 228 - -
Phco2g02884 638 FunFam Somatic embryogenesis receptor kinase 1 284 391 - -
Phco2g02884 638 SMART LRR_typ_2 169 192 IPR003591 -
Phco2g02884 638 SMART LRR_typ_2 193 217 IPR003591 -
Phco2g02884 638 SMART LRR_typ_2 145 168 IPR003591 -
Phco2g02884 638 SMART LRR_typ_2 121 144 IPR003591 -
Phco2g02884 638 Pfam Protein kinase domain 316 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02884 638 SUPERFAMILY Protein kinase-like (PK-like) 294 590 IPR011009 -
Phco2g02884 638 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Phco2g02884 638 FunFam Putative LRR receptor-like serine/threonine-protein kinase 55 239 - -
Phco2g02884 638 Gene3D Ribonuclease Inhibitor 55 239 IPR032675 -
Phco2g02884 638 FunFam Somatic embryogenesis receptor-like kinase 1 392 609 - -
Phco2g02884 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 40 600 - -
Phco2g02884 638 Gene3D Transferase(Phosphotransferase) domain 1 392 609 - -
Phco2g02884 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Phco2g02884 638 SMART serkin_6 315 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02884 Phco-Chr2 57979623 57986516 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Phco2g02884 Pkinase 1.9e-41 CL0016