Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02879 ATGGGTGCTTCGGGCTCCAAACTCGAGAAAGCTCTCGGCGACCAATTCCCCGAAGGAGAACGTTACTTCGGCCTTGAGAATTTCGGCAATACTTGTTACTGCAACAGCGTTTTGCAGGCATTATACTTCTGTGTTCCTTTTCGAGAACAATTGCTAGAGTATTATGCAAATAACAAGAACTTGGCAGATGGTGAGGAAAATCTTTTGTCTTGCTTAGCTGACTTATTTTCACAGATAAGTTCTCAGAAGAAGAAAACTGGTGTTATTGCTCCCAAACGATTTGTTCAGAGGTTGAAAAAACAGAATGAACTCTTCCGTAGCTATATGCACCAGGATGCTCATGAATTCTTGAACTTTTTGCTAAATGAACTTGTTGACATTCTGGAGAAAGAGGCCAAAAGAAAGGATCAAGAAACATCACCACCATCTGAAAAGGCTGCAAATGGACCTAATAATGGTCTATCTAATGGTGCTGAAAAAGAGCCTTTAAGAACTTGGGTGCACAAAAATTTTCAGGGAATACTCACTAACGAAACTAGGTGCCTGCGTTGTGAAACTGTGACAGCCAGGGATGAAACATTTTTTGACTTGAGCCTTGATATTGAACAAAATAGTTCAATTACAAGTTGTTTGAAAAACTTCAGTTCAATGGAGACATTGAATGCTGAAGACAAATTTTGTTGTGACAAGTGCTGCAGTTTGCAGGAAGCTCAGAAGAGAATGAAGATAAAGAAACCACCACACATCTTGGTCATACACCTTAAGCGGTTTAAATACATTGAACAGCTGGGACGCTACAAGAAGCTGTCTTACCGGGTTGTCTTCCCTCTTGAGCTGAAATTAAGCGATACTGTTGAAGATTCCGATATTGAGTATTCTCTATTTGCAGTAGTTGTTCATGTTGGGAGTGGGCCCAACCACGGGCATTATGTAAGCCTTGTGAAAAGCCACAACCATTGGTTATTTTTTGATGACGAAAATGTTGAGATGATTGATGAGTCTGCTGTTCAGACATTTTTTGGGTCATCGCAAGAGTATTCCAGCAATACAGACCATGGTTACATTTTGTTCTATGAGAGCATTGGCTCTGGTAACAAGAACTAG 1104 0.404 MGASGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKNLADGEENLLSCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAKRKDQETSPPSEKAANGPNNGLSNGAEKEPLRTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSMETLNAEDKFCCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSDTVEDSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESIGSGNKN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02879 367 Gene3D Cysteine proteinases 5 360 - -
Phco2g02879 367 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 23 361 IPR028889 -
Phco2g02879 367 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 24 361 - -
Phco2g02879 367 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 24 39 IPR018200 GO:0004843|GO:0006511
Phco2g02879 367 Pfam Ubiquitin carboxyl-terminal hydrolase 23 358 IPR001394 GO:0004843|GO:0016579
Phco2g02879 367 MobiDBLite consensus disorder prediction 132 159 - -
Phco2g02879 367 FunFam Ubiquitin carboxyl-terminal hydrolase 3 5 360 - -
Phco2g02879 367 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 292 310 IPR018200 GO:0004843|GO:0006511
Phco2g02879 367 CDD Peptidase_C19G 24 359 - -
Phco2g02879 367 SUPERFAMILY Cysteine proteinases 21 360 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02879 Phco-Chr2 57947814 57951547 Dispersed/Wgd