LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco2g02863	ATGGTGCTGATCAACGAAGGAATTGACCCCTACTTCCAAGAGGAAATCACTGAAGAAGAGAACCAAGATGAGAACATCGACTATGACCAGCTGAAAAAACGCATGTGGAAGGATAGGATTCTGCTACAGAAGCTGAAGGAGAAACGCGAGAAACAAGAGCCAGACAAAGAAGCAAAAATAGAGGCATCGAGAAGGAAGAAAATGTCAAGAGCACAAGACTCGGTCCTCAAGTACATGGTGAAGATCATGGAAGTCTGCAACGCCCAAGGTTTTGTTTATGGCATCATCCCAGAAAAGGGAAAGCCTGTGTCTGGTTCCTCCGATAGCTTGCGAGAGTGGTGGAAGGACCAAATCCGCTTTGACCAAAGCGCCCCCAGTGCAATCTTGAATTACTTGCCACTCTTAGAAAAAGACAAGATGGATATAACTTCCTATATTCACCTCCTCCAAGACTTGCAAGACTCTACTTTGGGTTCTCTCCTATCTGCTCTCCTGCAACACTGTGTCCCTCCACAAAGAAAGTTCCCTTTGGAGAGAGGCTTATCTCCCCCTTGGTGGCCCACCGGGGAGGAACTTTGGTGGGGTGAGCAAGGCCTTCTGGCCCAAGAACATGGCCCCCCTCCTTATAGGAAGCCCCATGACTTGAAAAAGGCCTGGAAAGTTTCTGTTCTGGCTGCGATTATCAAACACATATCACCTGATTTCGATAAACTCAGAAGGTTGGTGACTCAGTCGAAAACCTTGCAAGATAAGATGACAGCCAGGGATAGTTCGACTTGGTCCAAAGTCATGAACCAAGAAGAGGTTTTACTAGGAATAACTGACAAGTGCCACGAAATATCTCTTTCAAAGGAAGATGTTGAGAACCATGAAGAGGGAGAAGGCTCTGGATCTGCTCAACTTTTGAAGAGGAAGGGCTCTTTTGGTAGTGCTAGTGAGGATGATAAGTTATACGCATGTCAAAACGTTGAGTGTCCACAGAGCAAGTTGTCTATGGGGTTTGTGGATAAGAACGCGAGGTTGGGCCATGAAGCTCTCTGTGCCTACCGCACAGAGGATAGCTACTTTCCTTTTCATCGTTATTTCTCCAATGAAGCATCACCAATCACGAGTTTAGATGATTGGATGAATGTGGCAATTCAGAATGATGCGAAGTTGGTGGAGGCTGCTGGTGGGAGTGGAACATTGGAAGCTAACGCCTGTTACTGGCTTAATGGTGTTGAAAATCTTGAATTGCAAACTGCACTAGAGATGTTACTGAACGATAACGAGGACTTTGGTCAAAACCCACTCCGGATTCCGCAGGTTCAAGAGGATGCAACCTCAATTTGGGACTTGCCATGCCATCCACCCCTATAG	1359	0.4643	MVLINEGIDPYFQEEITEEENQDENIDYDQLKKRMWKDRILLQKLKEKREKQEPDKEAKIEASRRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQSAPSAILNYLPLLEKDKMDITSYIHLLQDLQDSTLGSLLSALLQHCVPPQRKFPLERGLSPPWWPTGEELWWGEQGLLAQEHGPPPYRKPHDLKKAWKVSVLAAIIKHISPDFDKLRRLVTQSKTLQDKMTARDSSTWSKVMNQEEVLLGITDKCHEISLSKEDVENHEEGEGSGSAQLLKRKGSFGSASEDDKLYACQNVECPQSKLSMGFVDKNARLGHEALCAYRTEDSYFPFHRYFSNEASPITSLDDWMNVAIQNDAKLVEAAGGSGTLEANACYWLNGVENLELQTALEMLLNDNEDFGQNPLRIPQVQEDATSIWDLPCHPPL	452

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco2g02863	452	Gene3D	-	139	277	IPR023278	GO:0003700\|GO:0005634
	Phco2g02863	452	Gene3D	-	58	133	IPR023278	GO:0003700\|GO:0005634
	Phco2g02863	452	SUPERFAMILY	DNA-binding domain of EIN3-like	146	270	IPR023278	GO:0003700\|GO:0005634
	Phco2g02863	452	MobiDBLite	consensus disorder prediction	286	305	-	-
	Phco2g02863	452	FunFam	Ethylene insensitive 3-like 1	140	277	-	-
	Phco2g02863	452	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	14	353	IPR006957	GO:0003700\|GO:0005634
	Phco2g02863	452	Pfam	Ethylene insensitive 3	30	268	IPR047091	GO:0003700
	Phco2g02863	452	Coils	Coil	14	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco2g02863	Phco-Chr2	57828048	57829406	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Phco2g02863		EIN3	6.1e-114	No_clan