Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02859 ATGTGCAGGAACTCTAGTAACTCAGAGATGGTAGCTTCAAACAAAAGCACGTTAGAAGAGGTTTTGGACATTGAGAAGAACATGAATCAGTGGGTGCTCAATCCTCCAGATCCACCCTCCATGCTGCGTCAGGTCGTGGACAACGTCAAGGACATCCTCTTACCGCATCCACAGCCAAACACATTCTCTTCTCTCAGGAACCAACCCTTTTCAAGACGCGCTTTTGCCTTCCTGAAGAACTTGTTTCCCATTCTTGCTTCATTCCAAAATTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCTGGCCTAACCCTTGCAATCTTCGCCATTCCTCAGTGCATGGGAAATGCAACATTGGCGCAGCTAAGTCCAGAATATGGCCTCTACACAGGAATTGTGCCACCTCTTATTTATGCTCTGCTAGCGAGTTCAAGGGAAATAGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCCTCAATGATTCAGACATTGAAACTTCCAATTGATGATTCTATTGGATACACTCAGCTTGTTTTCACTGTAACTTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGCCTCTTTAGGTTTGGTTTTCTGGTGGAATATATTTCCCAATCCACGATCGTAGGGTTCTTGGCAGCAGCTGCTGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGTTACCAACAAAACTGCTTTATTTTCTGTGGTCAAATCTCTTTGGACATCCTTCAAAAACCAATCAACGTGGCATCCCTACAACTTCGTTATTGGATTCTCATTTCTATGCTTCATCCTATTTATGAGATTCCTGGGTAAAAGGAACAAGAAACTTATCTGGTTGTCACACGTTGCTCCTCTCTTTTCCATTATTGCATCCTCTATTATTGCGTACAAAATAAATGTTTATGAGCATCAAGTGAAGGACTACAGAGTTGAAGTGCTGGGACCAATTAAAGGAGGAGGTAGCTTGAATCCAAGCTCATTCAACCAGTTAACATTTGACAGCAGAGTTGTGGGTCATTTGATCAGAATAGGCTTGACCATTGCTATTATTTCATTCACGGGATCTATTGCTGTTGGACGATCATTTGCATCTCTAAAAGGACACAGTATTGATCCCAACAGAGAAGTGGTATCCTTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGGTCTTTGTCACGTACTGCTGTAAACTACGATGCTGGGTCAGAAACAGTGGCGTCGAACATAGTGATGGCACTGACGGTGCTCTTGTCACTTAAATTTTTGACAGGGCTTTTGTATTTCACTCCGAAAGCAATCTTAGCAGCGATAATTCTTTCGGCTGTACCAGGACTTATTGACCTAAAGAAAGCATGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGTGCTGGAGCCTTCTTCGGAGTCTTGTTTGCATCTGCGGAAATAGGCCTTGCAGTTGGGATCACGATATCATTCGCGAAGATAATTCTAACCTCAATTCAACCTGCTATAGCGGTCATAGGAAGGCTTCCAGGAACAGATTCATTCGGCGATGTTCAACAGTATCCAATGGCACTCAACATTCCTGGAGTTTTCATCGTCTCTTTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTGGAGGAAATGATTGAGAGATGGGTGACCAATGAAAAAGCTGAGCAGGGAAAAGAAAACACCTTCCATCACGTCATCATAGATGCCTCAAGTCTTACGAATATTGACACCACGGGAATTGCTTCTCTGGTGGAGCTCAATAAAAATATGACTTCACGTGGAGTAACGTTAGCTATCGCTAACCCAAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTCAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGGAGATGCAGTAGATGCTTGTGTTGCCACTAAAATGGTTGCTGTATAA 1995 0.4246 MCRNSSNSEMVASNKSTLEEVLDIEKNMNQWVLNPPDPPSMLRQVVDNVKDILLPHPQPNTFSSLRNQPFSRRAFAFLKNLFPILASFQNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSREIVIGPGSVDSLLLSSMIQTLKLPIDDSIGYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYISQSTIVGFLAAAAVGIGLQQLKGLFGIVTNKTALFSVVKSLWTSFKNQSTWHPYNFVIGFSFLCFILFMRFLGKRNKKLIWLSHVAPLFSIIASSIIAYKINVYEHQVKDYRVEVLGPIKGGGSLNPSSFNQLTFDSRVVGHLIRIGLTIAIISFTGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSLSRTAVNYDAGSETVASNIVMALTVLLSLKFLTGLLYFTPKAILAAIILSAVPGLIDLKKACEIWKVDKMDFLACAGAFFGVLFASAEIGLAVGITISFAKIILTSIQPAIAVIGRLPGTDSFGDVQQYPMALNIPGVFIVSLKSAWLCFANANLVEEMIERWVTNEKAEQGKENTFHHVIIDASSLTNIDTTGIASLVELNKNMTSRGVTLAIANPRWHVIHKLRLANFVSKIGGRVFLSVGDAVDACVATKMVAV 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02859 664 CDD STAS_SulP_like_sulfate_transporter 536 647 - -
Phco2g02859 664 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Phco2g02859 664 SUPERFAMILY SpoIIaa-like 542 656 IPR036513 -
Phco2g02859 664 NCBIfam sulfate permease 83 649 IPR001902 GO:0016020|GO:0055085
Phco2g02859 664 Pfam STAS domain 536 652 IPR002645 -
Phco2g02859 664 PANTHER SULFATE TRANSPORTER 62 656 IPR001902 GO:0016020|GO:0055085
Phco2g02859 664 ProSiteProfiles STAS domain profile. 555 656 IPR002645 -
Phco2g02859 664 Gene3D STAS domain 515 660 IPR036513 -
Phco2g02859 664 Pfam Sulfate permease family 96 483 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02859 Phco-Chr2 57794654 57801535 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02859 2 57794654 57801535 Phco2g02859 2 57794654 57801535 ECH
Phco2g02859 2 57794654 57801535 Phco7g01626 7 15711606 15712695 ECH