Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02829 ATGGATTGTTGTGTGTGTACAACTATGCCACTGATACTAAGGCCTCCGAGGAATACAATATGTGGGACATGTTACGAAGGAGTAAGGAGCATAATCAACATGATGGGCAATGTCGAAAGTGAGAAGGTAAAAGCAATAGTGGCCAATCCAAATCCAAACACTTCTCCACTTTCACGAAGAAATTCGAGTAAGACACTTGAAGATTGTATAAGATGGTGTTCAGAGCAGATGGAACAGCTTAATCAACAAAAGCAAGACTTGGTTTTCCTGAGAGGCTTTGTTGCAGCCTTCAAAGCACAGATTCACACAGATATATTGGTCACTCCAGGGAGACACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCTGCGAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAGTGCAAAGAAGCACCGAGTAACAGCATAACTATACCCGATTTGAAGCATGAGGAACTAGAGTGTCTGCTTGAGTTTCTGTACAGTGGGAGTTTGGGTGTGGAAAAATTGGAGAAACATGTGTACGCGTTGTCACAAGCAGCGGATAAGTATATGATCCCATATTTGCTGAAACACTGCGAACGGTACCTGCTGAGTTCGCTGAGCACTTGTAATGCCCTTGAGACACTGGAGATTGCAGACACTTGTTCCAACCACAACTTGAAGGAGACAACCTTGGATTTCTTGGTTAAGAACATTGATCGTGTTGTGTCCTCACCTAAATTTGAAGCTTTTGTTCATAGGAGCCCACACCTCACTGTGCAACTAGTTACAAGGGCCTTTGCCAATGGTGCCAAATAA 813 0.4354 MDCCVCTTMPLILRPPRNTICGTCYEGVRSIINMMGNVESEKVKAIVANPNPNTSPLSRRNSSKTLEDCIRWCSEQMEQLNQQKQDLVFLRGFVAAFKAQIHTDILVTPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSNSITIPDLKHEELECLLEFLYSGSLGVEKLEKHVYALSQAADKYMIPYLLKHCERYLLSSLSTCNALETLEIADTCSNHNLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTRAFANGAK 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02829 270 Gene3D Potassium Channel Kv1.1; Chain A 71 205 IPR011333 -
Phco2g02829 270 Gene3D - 206 269 - -
Phco2g02829 270 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 267 IPR044784 -
Phco2g02829 270 ProSiteProfiles BTB domain profile. 103 173 IPR000210 GO:0005515
Phco2g02829 270 SUPERFAMILY POZ domain 89 203 IPR011333 -
Phco2g02829 270 Pfam BTB/POZ domain 100 204 IPR000210 GO:0005515
Phco2g02829 270 CDD BACK 206 246 - -
Phco2g02829 270 SMART BTB_4 103 205 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phco2g02829 BTB 3.3e-20 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02829 2 57604141 57605179 Phco2g02829 2 57604141 57605179 ECH