Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02797 ATGAACAAAAACTGGAAATCCAGCTGCTTCAGGGATCCTCCGTTCCTTCTGGCGTTGTGTTTGTTGTTTCAGAACTTTAGTTCCTGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTCTGAAGTTCAAGCAGGGAATAGTTAGAGACCCTTCTGGTGCTTTGTCAAATTGGGTTAACGATGAAGTAGCAGTCAACCATTGTAATTGGTTTGGCGTTGAGTGCTCTGCGGGAAGGGTGGTAGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGCTCGCAAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGGATTGCACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACATCTACCTAAAGATCTTGGGAATAATATTTCACTAACAATCCTTTTGTTGGACAACAATGATCATCTCTGTGGTTTCTCTCCTGAAATTAATAAATTGAAGATGATTTCTGAATATCAAGTAGATGAAAGACGACTAAATATGGCAGGAAAAGTGCCAGCTTGTACAAGAAGATTCATCAAACGGCACATTGACAAAAATAAGAAAGGTTCAAGGAGGCTACTGCAATTTCCTCGTGATGGTGGAAGTCCTTTCGACCGTACTGCTACTTTTCCTGATAGTCCTGTTCCATCACCTTCAGCTCCCTCACCGGCTCCAGCAACACCACCCGTTGAGAAGCCAGCTTCCGCTGACCGAAATGATTCGGCTTCTGCTTCTCCTCTGCGTGAACCAAGCTCTGCACCACCATCTAAAAGTAGCTCATCAAAAAACAATCTTGTTCGTATTTTGGCTGGAGTTATAGGTGGTGCTGTATTTATTGTCATTTCAATCATTGGGATATATCTCTGCAAAACAAACAAGGTGGCTACTGTAAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTCGTAACGGGTGTGCCAAAGCTGAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCACTTCATCCCTTGGCACTGTGTACAAAGGGACTTTGTCCAGTGGTGTTGAAATAGCTGTGGCCTCTGTTGCAGTGACAGCATCAAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATACGCCCCAAATGGAACTCTCTTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGGATTGGGAAACAAGACTTAGAGTCGCCATGGGCATGGCTTACTGCCTACAACATGTGCACCAGTTGGAGCCTCCTTTGGTTCTTGGCAACCTGAATTCTTCAGCTGTTCAACTCACTGATGATTGTGCTGCCAAAGTCTCTGATTTTAGTTTCTTAACTGAAATAGCTTCAGCTGTGATAAAATCTTCTGCTAGACAGCACCCTGACATGACCCCAGCAAGTAACATTTACAGTTTTGGTGTTATATTATTTGAAATGGTGACAGGCAGGCTCCCTTATTCAGTGGACACTGATGGCTCTCTTGATGACTGGGCTTCACAATATTTACACGGGGATCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCTTGCTTCCAAGAAGAACAGCTGGAACAAGTTGATACTTTAATCAAATCTTGTGTCCATCCTGATCAAAAGCAGAGACCAACTATGAAAGAGGTTTGTGCGAGATTAAGAGAGATAACAAAAATAACACCCGAAGCTGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCGGTAAATGGAAACTGA 1920 0.4229 MNKNWKSSCFRDPPFLLALCLLFQNFSSCCSLNEEGKALLKFKQGIVRDPSGALSNWVNDEVAVNHCNWFGVECSAGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLNELEVLDLGYNNFSGHLPKDLGNNISLTILLLDNNDHLCGFSPEINKLKMISEYQVDERRLNMAGKVPACTRRFIKRHIDKNKKGSRRLLQFPRDGGSPFDRTATFPDSPVPSPSAPSPAPATPPVEKPASADRNDSASASPLREPSSAPPSKSSSSKNNLVRILAGVIGGAVFIVISIIGIYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSLGTVYKGTLSSGVEIAVASVAVTASKDWSKTLEAQFRKKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWETRLRVAMGMAYCLQHVHQLEPPLVLGNLNSSAVQLTDDCAAKVSDFSFLTEIASAVIKSSARQHPDMTPASNIYSFGVILFEMVTGRLPYSVDTDGSLDDWASQYLHGDQPLKEMVDPTLACFQEEQLEQVDTLIKSCVHPDQKQRPTMKEVCARLREITKITPEAAVPKLSPLWWAELEIASVNGN 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02797 639 MobiDBLite consensus disorder prediction 234 250 - -
Phco2g02797 639 MobiDBLite consensus disorder prediction 209 281 - -
Phco2g02797 639 SUPERFAMILY Protein kinase-like (PK-like) 332 608 IPR011009 -
Phco2g02797 639 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Phco2g02797 639 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Phco2g02797 639 FunFam Nuclear pore complex protein NUP107 32 193 - -
Phco2g02797 639 PANTHER PROTEIN MALE DISCOVERER 2 14 636 - -
Phco2g02797 639 Pfam Protein tyrosine and serine/threonine kinase 351 608 IPR001245 GO:0004672|GO:0006468
Phco2g02797 639 Gene3D Phosphorylase Kinase; domain 1 321 431 - -
Phco2g02797 639 SUPERFAMILY L domain-like 32 172 - -
Phco2g02797 639 FunFam Inactive receptor-like serine/threonine-protein kinase 323 431 - -
Phco2g02797 639 Gene3D Transferase(Phosphotransferase) domain 1 432 620 - -
Phco2g02797 639 MobiDBLite consensus disorder prediction 258 281 - -
Phco2g02797 639 ProSiteProfiles Protein kinase domain profile. 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02797 Phco-Chr2 57378198 57382337 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Phco2g02797 PK_Tyr_Ser-Thr 1.9e-25 CL0016