Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02779 ATGGCGAATTCAGGTGCATCCCTTGTCCATAGTTTTGCTTCGATTGTGGAATATGCTATTAGAAGTATTGGAGGAGATTTGGGGGCATTTCCTTTGCGTGATTTTTCTTTGGCAGTGGAGAATGCGTGGAGTAGTATTGGAGGAGATTTCGGAGCAGTACCTGTTCATGCTTTTGCTTCTACAGTGGAGAATATGATAAGAAGTATTGGAGGAGATTTGAGAGCATTACCCGTGCATGGTTTTGCTTCGGCAGTAGAAAATGCGATGAGAAGTATTGGAGGAGATTTGGGAGTATCACCCCTGAACGGTTTTGCTTCGAGAGTGGAGAATGCTATGAGTAGCATTGGTGGAGATTTGGGAATATCCCATTCCCCTGTGCATGGTTTTCAATTATTCACCTTAGTTGAGCTTGCAGCAGCCACAAACAATTTCTCAGTTGACAACAAGATTCGTGCTGGAAGCTCTAGTGTTGTGTACAGGGGCAAACTCGTTGATGGGAGTGAGGTTACAATAGAAAGAGTAGAAACGTGGAGGAGAAGAACGGTCGAAGAGGCCTTCTGGTGGAGGAGAACGTCTAGTTTGAACTTTTTGCCCGGTTTACGTCCCAAGAACTTGGTTGGGCTGGTTGGGTTGTGTGACGAGAAAAATGAAAGGGTGTTGGTGTATGAGTGCATGAAGAATGGGTCGTTGTATGATCATTTACATGAGAAGGGTAGCAATGTGTTGAATTCGTGGAAAATGAGGATAAAAATTGCTTTGGATGCTTCCCGAGGAATAGAATATCTGCATAAGTATGGAGTTCCATCTCCTGTTCATGGAGATATCAACCCTTCCAACATTCTTCTTGATGCTAGCTGGACGGCAAAGGTATCTAACATTGGGAAGGCAGCAGGAACGTTTGGATACATTGATCCTGAGTACTATGATCTAAATGTGTTGACAACAAAGAGTGATGTGTATGGATTTGGGGTTGTGCTGCTTGAACTTTTAACAGGAAAAGATGGACGCACCATATTATTACATGAACCCTTTGCAGAGGCTAGTATTTTGGGTGGAGATTTTGTGAAAATTTTGGATAAAAGGGTTGGAGAACCCCATCTGAATGAAGCTAAGGCAGTGGAGCTAGTGGCCCATACCGCCATCAATTGTGTAAATGTGGAAGGAAACGTTCGACCAACTAGTGCTGAGGTTGTGGTCAATTTGGAGAGGGCTTTTGCTTATTTGCATTCCTAG 1233 0.4363 MANSGASLVHSFASIVEYAIRSIGGDLGAFPLRDFSLAVENAWSSIGGDFGAVPVHAFASTVENMIRSIGGDLRALPVHGFASAVENAMRSIGGDLGVSPLNGFASRVENAMSSIGGDLGISHSPVHGFQLFTLVELAAATNNFSVDNKIRAGSSSVVYRGKLVDGSEVTIERVETWRRRTVEEAFWWRRTSSLNFLPGLRPKNLVGLVGLCDEKNERVLVYECMKNGSLYDHLHEKGSNVLNSWKMRIKIALDASRGIEYLHKYGVPSPVHGDINPSNILLDASWTAKVSNIGKAAGTFGYIDPEYYDLNVLTTKSDVYGFGVVLLELLTGKDGRTILLHEPFAEASILGGDFVKILDKRVGEPHLNEAKAVELVAHTAINCVNVEGNVRPTSAEVVVNLERAFAYLHS 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02779 410 Gene3D Phosphorylase Kinase; domain 1 120 224 - -
Phco2g02779 410 ProSiteProfiles Protein kinase domain profile. 144 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02779 410 Gene3D Transferase(Phosphotransferase) domain 1 225 407 - -
Phco2g02779 410 Pfam Protein kinase domain 145 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02779 410 SUPERFAMILY Protein kinase-like (PK-like) 119 404 IPR011009 -
Phco2g02779 410 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 122 407 IPR044815 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02779 Phco-Chr2 57227122 57228354 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco2g02779 Pkinase 4.3e-21 CL0016