Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02777 ATGGACACTGAAAGCGTTGAGAGCATTGAGATGTGGAATTATGGTACATTTGATGCATTGAGTTTTAGTTTGGCTGTGGACAATGAGATTAGGAGTAGGACTTCGTCAAATTTGGGAGCATCCTCCCCTCTCCATAGTTTTGCTTCGCTACTGGACATTGCTATAAGGAGTAGAACTTCCTCAAATTGGGAAACATCTTCTGCCAATTCTTATGCTTTTGGATTGGACAATGCAATAAGGAGTAGGACTTCGTCAAACTGGGAAACATCTTCTGCCTATTCTTTTGCTTTTGGAGTGGACACTGCAATAAGGAGTAGGACTTCGTCAAATTGGGAAACATCTTCTGCCCATTCTTTTGCTTTTGGAGAGGACAGTGCAATAAGGAGTAGTACTCCGTCAAATTTTGGATCTTCCCGTGTGCCCAGTTTTGCTTCGGGAGTGGACTATGTGATTAGGAGTAGTAACGGAGGAACAGATTCAGAAACCTCCCCTGTTCATGGTTTTGCTTCGGAAGTTTACTCCAGGACTGTTGCTGCAGGATCATCACAAATGGCGTCGAATGTCACAGGACACGTTGCTAAAGGCTTACAATTATTCAGCCGGGCAGAGCTTGTAGCAGCCACCAACAATTTCTCACTTCACAACAAGATTGGTGTTGGAAGCTTTGGTGTCGTGTACGGAGGCTTACTTGTTGATGGTAGGGAGGTGGCTATCAAAAGGAATGAAACCAGTCCCAAGATGAAGGAGTTTCAAAAGATTGTATTTGGGTATTTAGTGACCTTCTTGCGTCGTCTACACCACGAGCACTTGGTAGGGCTAGTAGGATTCTGTGAAGAAAAAGATGAGAAACTCTTGGTGTATGAGTACATGAAAAATGGGTCGTTGTATGATCATTTGCATCACAAGGGTAGCGCTGAGTTGAATTCGTGGAAAATGAGGATCAAGATTGCTTTGGATGCTTCCCGAGGAATAAAATATCTTCATTACTATGCAGGTACAAATATTTACAGGGATATAAAGTCTTCTAACATTCTTCTTGATGATACTTGGACGGCAAGAGTATCTGATTTTGGTTTGTCGTCGCTGATGAAGGCAGTAGGAATTATCATTGATCCTGAGTACTACGGTCAGTATGTGCTGACAGCAAAAAGTGAAGTGTATGCGTTTGGAGTTGTACTGCTTGAGCTTTTAACGGGAAAGAGACATATATTGTGTGGTGAAGATGGAGGCACCCCATTAAGTGTGGTGGAATTTGCAGTGCCTCCAATTTTGGGTGGAGATTTGGCCAAAATTTTGGATCCAAGGGTTGGAGCGCCCCATGTCAATGAAGCAAAGGCAGTGGAGTTAGTGGCCTTTACAGCTATCCACTGTGTGAATTTGGAAGGGAAAGATAGACCATCACTTGCTAAAATTGTGGTCAATTTGAAGAAGGCTTTGGCTATTATTTGTGACAGTAGTACCCATGATAGCATTTCCAGCCGTACTATCTTCGATGTTTCAGAATGA 1506 0.429 MDTESVESIEMWNYGTFDALSFSLAVDNEIRSRTSSNLGASSPLHSFASLLDIAIRSRTSSNWETSSANSYAFGLDNAIRSRTSSNWETSSAYSFAFGVDTAIRSRTSSNWETSSAHSFAFGEDSAIRSSTPSNFGSSRVPSFASGVDYVIRSSNGGTDSETSPVHGFASEVYSRTVAAGSSQMASNVTGHVAKGLQLFSRAELVAATNNFSLHNKIGVGSFGVVYGGLLVDGREVAIKRNETSPKMKEFQKIVFGYLVTFLRRLHHEHLVGLVGFCEEKDEKLLVYEYMKNGSLYDHLHHKGSAELNSWKMRIKIALDASRGIKYLHYYAGTNIYRDIKSSNILLDDTWTARVSDFGLSSLMKAVGIIIDPEYYGQYVLTAKSEVYAFGVVLLELLTGKRHILCGEDGGTPLSVVEFAVPPILGGDLAKILDPRVGAPHVNEAKAVELVAFTAIHCVNLEGKDRPSLAKIVVNLKKALAIICDSSTHDSISSRTIFDVSE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02777 501 Pfam Protein kinase domain 212 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02777 501 Gene3D Phosphorylase Kinase; domain 1 171 289 - -
Phco2g02777 501 SUPERFAMILY Protein kinase-like (PK-like) 191 474 IPR011009 -
Phco2g02777 501 ProSiteProfiles Protein kinase domain profile. 211 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02777 501 SMART serkin_6 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02777 501 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 153 486 IPR044815 GO:0004674
Phco2g02777 501 ProSitePatterns Protein kinases ATP-binding region signature. 217 239 IPR017441 GO:0005524
Phco2g02777 501 Gene3D Transferase(Phosphotransferase) domain 1 290 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02777 Phco-Chr2 57220941 57222446 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco2g02777 Pkinase 4.5e-32 CL0016