Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02739 ATGGCTTCAGTCACCACATTTTCTCTAATGTTACACTTTCTGTTGTTAATATCATCTTCTTCCTTTCATCAAGTAAGCTTAGCTTTCACCTGGCAAGAGTACCATGAGGCTCTTGAGAAATCCATTCTCTTCTTTGAGGGACAACGGTCTGGAAAATTGCCTTCCAACCAGCGACTAACATGGAGGGGAAATTCTGGATTGTCCGATGGCTCTTCTTATCATGTGGACCTAGTAGGTGGTTATTATGATGCTGGAGATAACGTTAAGTTTGGGTTGCCAATGGCCTTTACCACTACATTGTTAGCATGGAGTGTGATTGAATTTGGAAGCTCAATGATGGACCAGATTGAAAACGCTAGAGCTGCTATCCGCTGGAGCACTGATTACCTTCTGAAGGCTGCCACCACCACCCCTGACACATTATATGTCCAAGTAGGAGATCCGAACATGGATCACAAGTGTTGGGAAAGGCCTGAAGATATGGACACTCCACGCAATGTGTATAAGGTATCAGCTCAAAACCCAGGATCAGATGTAGCAGCAGAGACGGCAGCTGCACTGGCAGCTTCTTCAATAGTATTCAGAGATTCGGATCCAGCATATTCCTCCAGATTGCTTCAAGCAGCCATCAAAGTATTCAATTTTGCAGACCGTTACAGGGGTTCTTACAGTGATTCTCTTGGTTCTGTTGTCTGTCCATTCTATTGCTCTTACTCTGGATACCATGATGAACTTCTGTGGGGTGCATCGTGGATTTATAAAGCCTCAGGAACTAGCTCATACATGCAATATATACGATCCAATGGCCACATTTTAGGTGCTGATGATGATGGTTTCTCCTTCAGCTGGGATGATAAGCGACCTGGAACCAAAATCCTCCTTTCCAAGGAATTCTTGGAGAAAAATTCAGAAGAGTTCCAATTATACAAGGCACATTCAGATAATTACATTTGTTCGCTAATGTCGGGAATCCCTGGTTCTCAGGCTCAGTACACCCGAGGGGGGCTTCTGTACAAGGGGAGTGAGAGCAATTTGCAGTACGTGACATCGACAAGTTTCCTTCTGTTGGCATACGCTAAGTATCTTTCTGCAAACGGGGGCGTTGTCCGATGTGGGACTTCAACGGTCACGGGTGAAAAGCTCGTAACACTAGCCAAAACACAAGTAGACTATATTTTGGGCAATAATCCAGCAAAGATGTCTTATATGGTGGGTTTCGGGGAGAGGTATCCAAAGCATATCCACCACAGGGGTTCCTCTCTACCTTCCATTGGTGCCAGGACTGAGCACATATCCTGCAACGAGGGGTTTCAGTATCTGCATGCAGGCTCTCCCAATCCAAATGAGCTTGTTGGAGGCATAGTAGGTGGTCCTGATAGCAATGACAACTTCTCCGATGATCGAAATAACTATCAGCAGTCAGAGCCAGCAACTTACATCAATGCACCGTTTGTAGGTGCTGTTGCCTATTTCTCTGCTAAACCACCAACCTATTAA 1497 0.4516 MASVTTFSLMLHFLLLISSSSFHQVSLAFTWQEYHEALEKSILFFEGQRSGKLPSNQRLTWRGNSGLSDGSSYHVDLVGGYYDAGDNVKFGLPMAFTTTLLAWSVIEFGSSMMDQIENARAAIRWSTDYLLKAATTTPDTLYVQVGDPNMDHKCWERPEDMDTPRNVYKVSAQNPGSDVAAETAAALAASSIVFRDSDPAYSSRLLQAAIKVFNFADRYRGSYSDSLGSVVCPFYCSYSGYHDELLWGASWIYKASGTSSYMQYIRSNGHILGADDDGFSFSWDDKRPGTKILLSKEFLEKNSEEFQLYKAHSDNYICSLMSGIPGSQAQYTRGGLLYKGSESNLQYVTSTSFLLLAYAKYLSANGGVVRCGTSTVTGEKLVTLAKTQVDYILGNNPAKMSYMVGFGERYPKHIHHRGSSLPSIGARTEHISCNEGFQYLHAGSPNPNELVGGIVGGPDSNDNFSDDRNNYQQSEPATYINAPFVGAVAYFSAKPPTY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02739 498 Gene3D - 30 496 IPR012341 GO:0005975
Phco2g02739 498 Pfam Glycosyl hydrolase family 9 34 487 IPR001701 GO:0004553|GO:0005975
Phco2g02739 498 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Phco2g02739 498 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Phco2g02739 498 SUPERFAMILY Six-hairpin glycosidases 33 493 IPR008928 GO:0005975
Phco2g02739 498 FunFam Endoglucanase 30 495 - -
Phco2g02739 498 PANTHER ENDO-1,4-BETA-GLUCANASE 11 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02739 Phco-Chr2 56899947 56902472 Dispersed/Transposed