Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02706 ATGGAGTTCACCACCAGTCACTTTCTCTTGGCAATTCTGCTGCTGATGCTATCACGCGCCCCGCACGTGTCCCCTGCCACGCCGTGCCCCGCATGCGGCAACACCACGGTGCCGTTTCCCCTCAGCACCACCTCGACATGCGGCGACCAGTCGTACAAAATCCGGTGCAGCTCCGGCACACTCATATTCGACACGTTGAACAACTCGTACCCGATCGAGTCCATTCACGCCAAATCACAGCGCCTTGTGATCCAGCCCGCGGCGCTCGTGCAGAACACGTGCGTCTCTACTGACAAGGTGCACCAGGGGATCCAGCTCAACAGCACCCTCCCCTTCAATATCACCAGTTCCAACACCATCGTCTACCTCAACTGCACCCTCACGCTACTCCAGTCCCCCCTAAACTGCTCCGCCGCCAGCGCCTGCAACGCCTACATCAACGCCACCGCCTCCGCCGCTGCCTGCCAGAGCGGGCCCCTCTGCTGCACCTACCGCACCGGCGGCTCCAGCAACTCCTATATGATTCGCGTTAGAGACTCTGGCTGCAGCGCCTACTCCAGCTTCGTTAACCTCAACTCGGCTGAACCTGTGAGCCGCTGGCCCGAACCGGGTTTGGAGATTCAGTGGCTCTCGCCTAGAGAAACCGTGTGTGGGTCCCAGGAGGATTGCGACTCTGCCACGTCGACTTGTGGGCCCGACGCCTCCTCTACGAGCGGGATCAAGAGGTGCTTCTGTCACGATGGGCTCGTGTGGGACCCCATCCAAGGGGTGTGCACTAAAAAAATTACTTGCCAGAACCCTGATGGTTGTGGGGACTCAACTAAAAAAAAGGCCATAATAGCAGGTTCAGTATGTGGGGCTGGAGCTGCAATCATCCTTGCCATCATTGCCTTTCTACTCTACAAACGCCACAAGCGCATTAAAGAAGCACAAGCACGGCTAGCCAAAGAGCGTGAAGGAATTCTGAATGCCAGTAATGGGGGAAGAGCGGCTAAACTTTTCAGTGGCAAAGAGATAAAGAAAGCCACAAACGACTTCTCCAATGACCGACTTCTTGGTGTTGGAGGCTATGGTGAAGTTTACAAGGGCTTTCTTCAAGATGGTACTGCTGTGGCTGTCAAGTGTGCTAAGCTTGGCAACGCCAAAGGCATTGATCAAGTCCTCAATGAGGTTCGCATATTATGCCAAGTTAACCACCGAAACCTTGTTGGTCTACTTGGTTGCTGCGTGGAACTGGAGCAGCCTATTTTGGTTTATGAGTTCATAGAAAATGGTACCCTTCTTGATCACTTGCAAAGTCAAATTCCTAAGGACCGTGGTTTGCTTAGTTGGACACATCGCCTTCAAATTGCACGTCATACTGCTGATGGTCTTGCTTACCTTCACTTCATGGCTGTGCCTCCTATCTACCACAGAGATGTCAAGTCCAGCAACATTCTGCTAGATATCAATATGAATGCCAAGGTTTCAGATTTTGGGTTGTCTAGGTTGGCTCAGACAGATATGAGTCATATCTCCACTTGTGCTCAGGGGACCCTTGGTTACCTTGATCCTGAGTATTATAGGAACTACCAATTGACTGATAAGAGTGATGTTTACAGTTTTGGAGTGGTGCTTCTTGAGCTTTTGACAGCTCAGAAGGCAATAGATTTTAACAGGGCACCAGATGATGTGAACTTGGCAGTTTATGTGCATAGAATGGTGGAGGAGGAACTGTTGGTGGATGTCATTGATCCAGTGTTGAAGAATGTAGCCACCAATATAGAGCTAGAGACTATGAAAGCAATGGCATTTCTGGCATTGGGCTGCTTGGAGGAAAAGAGACAGAATCGACCTTCAATGAAAGAGGTAGCAGAGGAGATTGAGTATATCATTAGTATTGCCTCAGCAAAGGTAGTGGAGTAG 1905 0.5113 MEFTTSHFLLAILLLMLSRAPHVSPATPCPACGNTTVPFPLSTTSTCGDQSYKIRCSSGTLIFDTLNNSYPIESIHAKSQRLVIQPAALVQNTCVSTDKVHQGIQLNSTLPFNITSSNTIVYLNCTLTLLQSPLNCSAASACNAYINATASAAACQSGPLCCTYRTGGSSNSYMIRVRDSGCSAYSSFVNLNSAEPVSRWPEPGLEIQWLSPRETVCGSQEDCDSATSTCGPDASSTSGIKRCFCHDGLVWDPIQGVCTKKITCQNPDGCGDSTKKKAIIAGSVCGAGAAIILAIIAFLLYKRHKRIKEAQARLAKEREGILNASNGGRAAKLFSGKEIKKATNDFSNDRLLGVGGYGEVYKGFLQDGTAVAVKCAKLGNAKGIDQVLNEVRILCQVNHRNLVGLLGCCVELEQPILVYEFIENGTLLDHLQSQIPKDRGLLSWTHRLQIARHTADGLAYLHFMAVPPIYHRDVKSSNILLDINMNAKVSDFGLSRLAQTDMSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTAQKAIDFNRAPDDVNLAVYVHRMVEEELLVDVIDPVLKNVATNIELETMKAMAFLALGCLEEKRQNRPSMKEVAEEIEYIISIASAKVVE 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02706 634 CDD STKc_IRAK 352 622 - -
Phco2g02706 634 Pfam Protein tyrosine and serine/threonine kinase 349 620 IPR001245 GO:0004672|GO:0006468
Phco2g02706 634 FunFam Wall-associated receptor kinase-like 20 308 421 - -
Phco2g02706 634 Gene3D Transferase(Phosphotransferase) domain 1 422 632 - -
Phco2g02706 634 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Phco2g02706 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Phco2g02706 634 SMART serkin_6 346 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02706 634 FunFam Wall-associated receptor kinase-like 20 422 634 - -
Phco2g02706 634 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Phco2g02706 634 ProSiteProfiles Protein kinase domain profile. 346 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02706 634 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Phco2g02706 634 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 624 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02706 Phco-Chr2 56636154 56639015 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco2g02706 PK_Tyr_Ser-Thr 2.4e-45 CL0016