Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02689 ATGGAGGAGTCTCAGTACCTGTTGTGGTTCAAGAGAAAACAAATCTTGAACTCACATATTCAACAACCATTTGGAGCCCGCAACGACAACACCAACTCATCATGGGAGGAAAGGGCTTTTGCAGAAGATGCTGCTAGGATACTTGGTGGGTGCATATGGCCTCCAAGATCTTACTCGTGTAATTTCTGTAAAAGAGAGTTTAGGTCTGCTCAGGCTCTAGGGGGACACATGAATGTGCACAGGAGGGACAGGGCTAGGCTCAAACAAAGCCTTAGTCACCATAATGAATCCCTTCAAGATCTTCACAAAAATGATTGTCCAGTTGCAACAAGCAAAGTCTCGTCTTCTAGGCCCTCAACTATATCCACTCAAGAAAATTGTTATCATCAGCCTACCATGTCTCCTTACTCTTCTTCAATTAGCTGGGGACATCACCACATGGGGTCTCCTGATTCAGAACCAAAAGGGTCTGCAGTGAATGGAAGGGAACAGTTTTTAAAAGGTTTGGGTTGCAATGATTATGTTGAAACAAGTTTGTCTGTGGGACAAAGTTCAGTGTTTGTCCAAAAGTTACCAATTGAATCATATGGGGACGAAGCTATCAGTTATAAAAGATCAAAGACTTCTATGCCTCCTTTGCCTGTCTTCCACAAGCCATGTTCAAGTGATAGACACCTAACTTTTCATTCTGCAGAATTTGTACTAAAGCCTGGAATGGAAGACTTAGATCTTGAACTCAGGCTGGGGAAGCCACAGAAAGTTATTTAG 768 0.4284 MEESQYLLWFKRKQILNSHIQQPFGARNDNTNSSWEERAFAEDAARILGGCIWPPRSYSCNFCKREFRSAQALGGHMNVHRRDRARLKQSLSHHNESLQDLHKNDCPVATSKVSSSRPSTISTQENCYHQPTMSPYSSSISWGHHHMGSPDSEPKGSAVNGREQFLKGLGCNDYVETSLSVGQSSVFVQKLPIESYGDEAISYKRSKTSMPPLPVFHKPCSSDRHLTFHSAEFVLKPGMEDLDLELRLGKPQKVI 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02689 255 Gene3D Classic Zinc Finger 55 128 - -
Phco2g02689 255 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 85 IPR013087 -
Phco2g02689 255 PANTHER OS07G0101800 PROTEIN 29 252 - -
Phco2g02689 255 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Phco2g02689 255 SMART c2h2final6 58 80 IPR013087 -
Phco2g02689 255 MobiDBLite consensus disorder prediction 108 128 - -
Phco2g02689 255 Pfam C2H2-type zinc finger 58 82 - -
Phco2g02689 255 SUPERFAMILY beta-beta-alpha zinc fingers 55 85 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02689 Phco-Chr2 56507455 56508313 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g02689 zf-C2H2_6 2e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02689 2 56507455 56508313 Phco3g00647 3 5243645 5252122 PCT