Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02683 ATGTGTTCTGTGCAAAGAGAAGATGCTAAGTTTGAAATAATTTTACCATATGTTTCTTATTGGACCGTCCTCCTCTATAATTTTGGGTTACAGTTTGCACTTAATGAATTTGGTGCCTTTTCCTTTTGTCCTATATTCTTGATTCTTCTTTATATTTTTGCCTGTCACTACAGCTTCATTTTCCAATATGAAGTACGTAACATTTGTGTACGAGTTTTTGGGTTGCTCTGCCTCGTGATGGCCAAAACCAGAACACTTGTTCTTGCGCTTCCTGTGTGTGTTTTGACCCTTCTTCTGGTCACAGACATTGCAAAGTCTCAAGAGTTTTTCTTCAACGGGTTTGGTGGTGCTTCTGCCACCAAAATAGCCTTAAACGGAGGAGCAGTGATTGAGCACAAGGGCTTGCTTCGTTTAACAAACAACACTGAGAGAGTAATTGGGCACGCGTTTTATCCAACTCCAATTCAGTTCAAGAACAACAACAAAAGCTCTTCCACCGACACAAAACTTTTCTCCTTTTCCACTGCTTTTGCGTTTGCAATCATTCCTCAGTACCCAAAACTCGGTGGCCACGGTTTTGCCTTCACCATTTCGCGCTCCACGTCCCTCGCGGACGCGTACCCGAGCCAGTACTTGGGCCTCCTCAACCCAAAAGAAGTGGGGAATTTCTCAAACCACCTTTTCGCAGTGGAGTTCGATACCGTCCAAGACTTCGAGTTCGAGGACATCAATGACAACCATGTCGGTGTGAACCTCAACAACATGGTATCCAACAAATCCGTAGAAGCTGCGTTTTTCCCTGAGGACTCTGCCAATAAGCAAAACCTGAGTTTGAAGAGTGGTAAAGTGATACAAGCATGGGTTGATTATGATTCATCAAATAACCAATTGGAGGTTAGACTCTCCCCAACTTCCTCCAAACCCACTTACCCAATTTTAAAATACGAAGTAGATCTCTCACCAATTCTCCAAGATTCCATGTACGTGGGGTTCTCTTCTTCAACAGGGTTACTAGCAAGCATACACTATATTTTTGGTTGGAGCTTCAAAATAAACGGAGAGGCCAAAACACTTTCCTTGCACAACCTCCCATCGCTCTCTGCCCCTAACAAAACTCAAAACCACTTAATCTTAGGACTCTCCCTTTCATTCATTCTAACACTCGCCACAGTTTCTCTGGCGTGTTACCTATTCAGAAGGATGAAGAACACCGAAGTAATCGAAGCTTGGGAGAGGGACGTTGTTGGGCCGCACAGATTCCCATACAAAGAGCTGCACAAAGCCACCAAGTGTTTCAAAGACAAGAACCTCCTCGGGTTTGGAGGGTCCGGTCGCGTCTACAAAGGGGTTCTCCCGAAGACCCACATGGAAATCGCGGTGAAGCGAATCTCGCACGAATCTAAACAACGTATGCAGGAGTTTGTGTCAGAAGTATCAACCATAGGAAGACTCCGACACAGGAACCTCGTACACTTACTGGGTTGGTGTCGGAAACAAAACGACCTTCTACTCGTGTACGATTTCATGAGAAATGGAAGCTTGGACAGATACTTGTTCGATCAACCAAGGAAAATACTAACATGGGAGGAAAGGTTTAAGATAATAAAGGGGGTGGGATTGGGGTTGGTGTATTTGCATGAGGAGTGGGAACAGACGGTGATTCACAGAGACGTCAAAGCTGGGAACGTTTTGCTGGATAACGACATGAATGGGAGGTTGGGGGATTTTGGGTTGGCCAAGCTTTATGAGCATGGTGCCAACCCTAGCACCACACGTGTGGTGGGAACGATGGGGTACCTTGCACCTGAACTCACACGAACGGGGAAACCCACCACCAGTTCTGATGTTTACGCCTTCGGAGCATTGTTGTTGGAGGTGGTGTGTGGGAGAAGACCGATCGACGTGAAGGCGTTGCCGGAGGAGCTGGTGCTTGTGGACTGGGTCTGGGAGCGGTGGCGCATGGGGGCGCCGCTGGCGGTGGTGGACTCCAGGTTGGGTAGTGCGTTTGATGAGGTGGAAGTTTTGCTGGTGATCAAAGTGGGGTTGTTGTGTTCCGCAGAGATACCGGAGAAGAGGCCCAGCATGAGGCAGGTGGTGAGGTACTTGGAGAGGGAGGTGGCGCCGCCGCCGCCGGTGGTAGATGGTGGTGGTGGCTGCTATGGAGAGTTGCATTCGTATTCGCCGTGGTCGTCGGTGGGTGATGACGTGGCGTCGTCGCTTTCACTTTCTGGTGGCCGGTAA 2241 0.4819 MCSVQREDAKFEIILPYVSYWTVLLYNFGLQFALNEFGAFSFCPIFLILLYIFACHYSFIFQYEVRNICVRVFGLLCLVMAKTRTLVLALPVCVLTLLLVTDIAKSQEFFFNGFGGASATKIALNGGAVIEHKGLLRLTNNTERVIGHAFYPTPIQFKNNNKSSSTDTKLFSFSTAFAFAIIPQYPKLGGHGFAFTISRSTSLADAYPSQYLGLLNPKEVGNFSNHLFAVEFDTVQDFEFEDINDNHVGVNLNNMVSNKSVEAAFFPEDSANKQNLSLKSGKVIQAWVDYDSSNNQLEVRLSPTSSKPTYPILKYEVDLSPILQDSMYVGFSSSTGLLASIHYIFGWSFKINGEAKTLSLHNLPSLSAPNKTQNHLILGLSLSFILTLATVSLACYLFRRMKNTEVIEAWERDVVGPHRFPYKELHKATKCFKDKNLLGFGGSGRVYKGVLPKTHMEIAVKRISHESKQRMQEFVSEVSTIGRLRHRNLVHLLGWCRKQNDLLLVYDFMRNGSLDRYLFDQPRKILTWEERFKIIKGVGLGLVYLHEEWEQTVIHRDVKAGNVLLDNDMNGRLGDFGLAKLYEHGANPSTTRVVGTMGYLAPELTRTGKPTTSSDVYAFGALLLEVVCGRRPIDVKALPEELVLVDWVWERWRMGAPLAVVDSRLGSAFDEVEVLLVIKVGLLCSAEIPEKRPSMRQVVRYLEREVAPPPPVVDGGGGCYGELHSYSPWSSVGDDVASSLSLSGGR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02683 746 SUPERFAMILY Protein kinase-like (PK-like) 415 710 IPR011009 -
Phco2g02683 746 Gene3D - 105 366 - -
Phco2g02683 746 SUPERFAMILY Concanavalin A-like lectins/glucanases 106 367 IPR013320 -
Phco2g02683 746 PANTHER - 101 709 - -
Phco2g02683 746 SMART serkin_6 432 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02683 746 Gene3D Phosphorylase Kinase; domain 1 417 508 - -
Phco2g02683 746 FunFam L-type lectin-domain containing receptor kinase S.4 509 713 - -
Phco2g02683 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 553 565 IPR008271 GO:0004672|GO:0006468
Phco2g02683 746 CDD lectin_legume_LecRK_Arcelin_ConA 108 353 IPR001220 GO:0030246
Phco2g02683 746 ProSiteProfiles Protein kinase domain profile. 432 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02683 746 FunFam serine/threonine-protein kinase PBS1-like 399 508 - -
Phco2g02683 746 ProSitePatterns Protein kinases ATP-binding region signature. 438 461 IPR017441 GO:0005524
Phco2g02683 746 Pfam Legume lectin domain 107 362 IPR001220 GO:0030246
Phco2g02683 746 FunFam L-type lectin-domain containing receptor kinase S.4 105 357 - -
Phco2g02683 746 Gene3D Transferase(Phosphotransferase) domain 1 509 709 - -
Phco2g02683 746 CDD STKc_IRAK 438 704 - -
Phco2g02683 746 Pfam Protein kinase domain 432 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02683 Phco-Chr2 56464538 56469246 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phco2g02683 Pkinase 5.4e-46 CL0016