Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02670 ATGGTTCTCACTTTGAGCAAGAGAGTGCTATGCTTCATCGTCACTTTTACCTGTCTCTTGCAGCTTACAAAGCCTTCAAACTTGCGGGAAGACACGTTGCTCCAAGGCCATCCCCTTGCAGCAACGAACCGTTTGATTTCGCCTTCAGGTTTATACACACTGCGTTTCTTTCAGCTTGATGGTGGCTCTGAAGCTAACACCAAATTCTACCTCGGCATATCAGCCAATAACTTCTCTTACTATGTTTGGCTTGCCAACAGGGACAATCCAATCCATGATGACCCTGGAGTTCTCACAATTGATGAATATGGCAACCTGAAAATTGTGTCAAGTACTACCACTATGATACTATATTCAGTTGAAGCAGAAAGTAACAAAAGTGTTAGAGCCTCTTTGCTAGATACAGGAAACTTTGTGCTTCATGAATTGAACTCAGATGGATCTGTGAAGAGGGTGTTATGGCAGAGCTTTGATTACCCCACAGACACAATTTTACCAGGGATGAAGCTTGGGTATGACAAGCACAGTGGCCACAAGTGGTCTCTAACAACAAGGAGAAGTTACAGAACTCTTTGGTCAGGGTCTTTCTCCCTCAGCCTTGACCCCAAAACTAACCAATTGGTTACTAGATGGAGAGGGGCCATTGTTTGGAGCAGTGGGGAGTGGAGAAATGGAAGTTTTTGCAATCTGAATTCTTCATCACATGAGAGAGAGAACTTCAATTTCACTTTTTTTTCAAATGAAAGCTTGACGTACTTTGAATATGCTTCAGTTTCTGGTTTTCTCATCATGGGACCATTGGGTATAATCAATGCTAGTGGTGTCCCTTACTCATGTACTGATAGTGAGATTGTGTCTGGTTGTGCAATGCCACAGCCTCCCAAATGTAGGAAAGATAGTGATTTGTACTTGCCAAGTTGGAATAGCTTTGGAGCAATGTCAAGGAAAGGATACATCTTTGATGAAAGAGAGAACTTGACCATTTCTGATTGCTGGATGAGGTGCTTGAAAAATTGCTCCTGTGAGGCTTACACTTATGCATTCAAGGATGCAACTGGCTGTGAAATATGGAGCAGACACACATCAGACTTTGTTGAGAGTAATTCCGGTGTTGGCCGTCCAATTTTCTTCTTTCTCAGCCAAACCAAAACCAAAGGCAAGAAGAGGAGAATATGGATTGAAGGTGCTGCGGTTGGAGTTCTTCTTCTGATAGTCTCATTCATTGCATCCTTTATCATGTTGTGGAGAAAACAAAAAGAAAGAGTTGAAAAGCGTAAGAAGCGAGCAAATATATTCTCTGACATTGGAGAAAATACTGAAATTTCTGTTGCATGCGATGAGGGAAGAGAACAATGGAATGAGAAGACAGGCAATGATACACATAAATTCGAGTTTATAACCATTCTTGAGGCAACAGACAATTTCTCTTTCACAAATAAGATCGGAGAGGGTGGCTTCGGACCTGTTTACAAGGGGAAATTACCAAATGGTCAAGAAATAGCTATAAAAAGACTTTCAAAAAGCTCGGGACAAGGATCGGTAGAGTTCAGAAATGAAGCTATGCTTATTGTGAAATTGCAGCACACTAACCTAGTGAGACTTTTAGGATTTTGCATTGAAAGAGAAGAAAGAATATTAGTTTATGAATACATGGCCAACAAAAGTTTGAATTTATACCTTTTCGATGCCACCACTAGAACTGAGTTAGATTGGAAGATAAGGTACAAAATTATCCAAGGAATTGCTCAAGGACTTGTATATTTACATCATTATTCAAGATTAAAAGTTTTACACAGAGATTTGAAGGCTAGTAACATTTTATTAGACAATGAGTTAAATCCAAAAATATCAGATTTTGGAATGGCTCGGATACTTACATGGACACGAGTGGAAGAAAAAACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGTTATGAGTGGAGTTATCTCAAGCAAAATTGATGTATACAGCTTTGGCGTGCTACTCTTAGAGATTGTGAGTGGAAAGAAGAATATTAGTGATAGTTTTTCGCTAAATCTTATAGGATATGCATGGCAATTATGGATTCAGGGGGAAGCTCTAAAGCTAATTGACACAATGTTGAATGGGTCATGCCCCGACATCCAGGTTATACGATGCATTCATATAGGTCTCTTGTGCACTCAAGACAAAGCAAATGACAGACCCACTATGCTTGAGGTTATTTCTTTTCTTTCAAATGAAAATACCCAATTGCCTTCCCCTCTACAACCACCACTTTATACCAGCAAAAGTGTGAAGGAGGAATGTTGCTCTAACAATGAAATAACATTGTCAATGACATCGGGCAAATAA 2349 0.3963 MVLTLSKRVLCFIVTFTCLLQLTKPSNLREDTLLQGHPLAATNRLISPSGLYTLRFFQLDGGSEANTKFYLGISANNFSYYVWLANRDNPIHDDPGVLTIDEYGNLKIVSSTTTMILYSVEAESNKSVRASLLDTGNFVLHELNSDGSVKRVLWQSFDYPTDTILPGMKLGYDKHSGHKWSLTTRRSYRTLWSGSFSLSLDPKTNQLVTRWRGAIVWSSGEWRNGSFCNLNSSSHERENFNFTFFSNESLTYFEYASVSGFLIMGPLGIINASGVPYSCTDSEIVSGCAMPQPPKCRKDSDLYLPSWNSFGAMSRKGYIFDERENLTISDCWMRCLKNCSCEAYTYAFKDATGCEIWSRHTSDFVESNSGVGRPIFFFLSQTKTKGKKRRIWIEGAAVGVLLLIVSFIASFIMLWRKQKERVEKRKKRANIFSDIGENTEISVACDEGREQWNEKTGNDTHKFEFITILEATDNFSFTNKIGEGGFGPVYKGKLPNGQEIAIKRLSKSSGQGSVEFRNEAMLIVKLQHTNLVRLLGFCIEREERILVYEYMANKSLNLYLFDATTRTELDWKIRYKIIQGIAQGLVYLHHYSRLKVLHRDLKASNILLDNELNPKISDFGMARILTWTRVEEKTNRIVGTYGYMSPEYVMSGVISSKIDVYSFGVLLLEIVSGKKNISDSFSLNLIGYAWQLWIQGEALKLIDTMLNGSCPDIQVIRCIHIGLLCTQDKANDRPTMLEVISFLSNENTQLPSPLQPPLYTSKSVKEECCSNNEITLSMTSGK 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02670 782 CDD B_lectin 38 160 IPR001480 -
Phco2g02670 782 Gene3D Transferase(Phosphotransferase) domain 1 551 752 - -
Phco2g02670 782 CDD STKc_IRAK 481 743 - -
Phco2g02670 782 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Phco2g02670 782 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 126 759 - -
Phco2g02670 782 Gene3D Phosphorylase Kinase; domain 1 438 550 - -
Phco2g02670 782 SMART blect_4 36 160 IPR001480 -
Phco2g02670 782 ProSiteProfiles PAN/Apple domain profile. 296 380 IPR003609 -
Phco2g02670 782 PIRSF SRK 2 265 IPR024171 GO:0004674
Phco2g02670 782 PIRSF SRK 274 782 IPR024171 GO:0004674
Phco2g02670 782 SMART serkin_6 475 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02670 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 440 550 - -
Phco2g02670 782 ProSiteProfiles Protein kinase domain profile. 475 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02670 782 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 223 IPR036426 -
Phco2g02670 782 Pfam Protein tyrosine and serine/threonine kinase 476 743 IPR001245 GO:0004672|GO:0006468
Phco2g02670 782 Pfam D-mannose binding lectin 81 186 IPR001480 -
Phco2g02670 782 Pfam PAN-like domain 324 360 IPR003609 -
Phco2g02670 782 SMART ntp_6 305 381 IPR003609 -
Phco2g02670 782 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 751 - -
Phco2g02670 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Phco2g02670 782 Gene3D - 26 157 IPR036426 -
Phco2g02670 782 SUPERFAMILY Protein kinase-like (PK-like) 459 762 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02670 Phco-Chr2 56344102 56348155 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco2g02670 PK_Tyr_Ser-Thr 7.5e-47 CL0016