Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02669 ATGGCTATCAGCCAAAGTATACTATGCTTCATCACTTTCACTTGTTTCATGCACATAACAAAACCTTCAAACTTGAACACAGACCAGTTACTACAGGGTCATGAGTTCACAACAAGTGATCGTTTGATTTCACCTACAGGTTGGTATACAATGAGTTTCTTTCAGTATAAAGGCTCTGAAGATTTCTACCTTGGAATTAGAAAATCAGCTGAAAATTCAACTAATCAGAATTTCTGGATTGCTAATAGAGACATGCCAATCCACGATCCTGCAACGTTTCTCATAATTGATGAATTTGGTAACTTGAAAATTATTTCCAACCGGGAAAGAAATTCCAGTATCATGCTCTATTCTTCTGATGCTGGAAGAGAAGTTAACAGCAATACTACCTTCAACGCCATATTGCAAGATACTGGCAACCTCATGTTCCGTGAAATGAACCAAAATGGATCTTTGAAGAGGATATTATGGCAAAGCTTTGATCATCTCTCACACGTTCTTATGATGGGGATGAGACTAGGGTTTGACAGAAAAACAGGTCAAAATTGGTCTATTACATCACGGAGAAGTGAAAAGACTTACTCGTCAGGGTCTTTCACCCTTGGCCTTGAGCCCAAAACGAAGCAATTGATGATATGGTGGCGGGGGAACATTTTTTGGAGTAGTGGGCAATGGAGCAATGGAACCTTTGCCAATTTAAAGTCTCCACTTTATCAGAAGGACTTCGAATTCGATTACTACTCAGATGAAAATGAAACCTATGTGTCATATCTTGCTAGTTATATCTACTTAGAACCTTCAGGTTCAATATATGGCGGCATATCTGGTGCTTCTTACTCATGCGTCAATAACTACTTTCTATCTGGTTGTTCAATGCCAAGTGTTCCCAAGTGTAGAGATCATGATAGTTTGTACCGAGGTAGCAGGAATAGCTATGGAGTAATGTCAGGGACGAGTTTCAAATTTGATGAAAGTGAGAACCTGACAAGTTTTGATTGTTGGATGAAGTGCTTGAATAATTGCAGTTGTGAGGCTTACTCTTACGTTAACGAGGATGAAACTGGCTGTGAGATATGGAGCAGAGACTCAGCAAACTTTGTGGCCACTACTAATTTGACTGCTGGAGGGCGTCAGATATACTTCCTTGTTGGTAGAAAAAAAGGCAAGACTAAGATATGGATCATAAGCACGATAGTTGGAACTATCGTCCTAATCATCTTATGCTTCACATGCAATAAGTTGCGGAAAAAATTAAAACTAAAAGCTGAAGATCGCAAGAAACGAACCAAATTATTGTCTGAAATCGGAGGAAATACTACAATTCCCATTGCTTACAATGAAAGAAACGAACAAAAGAAAAATGGAAAGAACAGTGATGATATGCATATTTTCGATTTCCAAACTATTCTTGAGGCAACTGCCAATTTTTCTTCCACAAATAAAATAGGAGAGGGTGGTTTTGGACCTGTCTATAAGGGAAAGTTGTCAAGTGGACAAGAAGTAGCCATAAAGAGACTTTCCAAAAGCTCAGGACAAGGAATATTTGGATTAACAGAATCCGAAGAACGAACTAACAGAATTGTTGGAACATTTGGGTATATGTCTCCAGAATATGCTATGATGGGTGTTATCTCAACTAAAATAGATGTTTACAGCTTTGGTATCCTTTTGTTAGAGATTCTAAGTGGAAAGAAAAATAGTACTGATTATCCATTTAATCTTGTTTTTAATGCATGGAAATTATGGAATGAAGGTGAAGCTCTAAATCTAATGGACTCAAACATGAATGGATCATACTCCCCTACCCAAGTGTTACGATACATTCATATTGGTCTCTTGTGCACACAAGATCAGGCAAGAGACAGACCCACTATGTTGGAGGTTGTTTCTTTTCTTTCAAATGAAATTACACATTTACCTCAACTTACACAACCAGGATTTTGTGTCACTGGAGGAATGGAAAATAGAGATGTGCACTACAGTTGTTCCATAAAGGAGACAACAAATTCATTGACATCAGGTAGATAA 2028 0.3797 MAISQSILCFITFTCFMHITKPSNLNTDQLLQGHEFTTSDRLISPTGWYTMSFFQYKGSEDFYLGIRKSAENSTNQNFWIANRDMPIHDPATFLIIDEFGNLKIISNRERNSSIMLYSSDAGREVNSNTTFNAILQDTGNLMFREMNQNGSLKRILWQSFDHLSHVLMMGMRLGFDRKTGQNWSITSRRSEKTYSSGSFTLGLEPKTKQLMIWWRGNIFWSSGQWSNGTFANLKSPLYQKDFEFDYYSDENETYVSYLASYIYLEPSGSIYGGISGASYSCVNNYFLSGCSMPSVPKCRDHDSLYRGSRNSYGVMSGTSFKFDESENLTSFDCWMKCLNNCSCEAYSYVNEDETGCEIWSRDSANFVATTNLTAGGRQIYFLVGRKKGKTKIWIISTIVGTIVLIILCFTCNKLRKKLKLKAEDRKKRTKLLSEIGGNTTIPIAYNERNEQKKNGKNSDDMHIFDFQTILEATANFSSTNKIGEGGFGPVYKGKLSSGQEVAIKRLSKSSGQGIFGLTESEERTNRIVGTFGYMSPEYAMMGVISTKIDVYSFGILLLEILSGKKNSTDYPFNLVFNAWKLWNEGEALNLMDSNMNGSYSPTQVLRYIHIGLLCTQDQARDRPTMLEVVSFLSNEITHLPQLTQPGFCVTGGMENRDVHYSCSIKETTNSLTSGR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02669 675 Gene3D Phosphorylase Kinase; domain 1 417 514 - -
Phco2g02669 675 ProSiteProfiles PAN/Apple domain profile. 298 385 IPR003609 -
Phco2g02669 675 Pfam PAN-like domain 326 362 IPR003609 -
Phco2g02669 675 Gene3D - 23 161 IPR036426 -
Phco2g02669 675 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 226 IPR036426 -
Phco2g02669 675 SMART blect_4 33 163 IPR001480 -
Phco2g02669 675 Pfam Protein tyrosine and serine/threonine kinase 529 632 IPR001245 GO:0004672|GO:0006468
Phco2g02669 675 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 622 - -
Phco2g02669 675 SMART ntp_6 307 384 IPR003609 -
Phco2g02669 675 Pfam D-mannose binding lectin 78 189 IPR001480 -
Phco2g02669 675 SUPERFAMILY Protein kinase-like (PK-like) 459 647 IPR011009 -
Phco2g02669 675 Gene3D Transferase(Phosphotransferase) domain 1 515 639 - -
Phco2g02669 675 ProSiteProfiles Bulb-type lectin domain profile. 27 156 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02669 Phco-Chr2 56338587 56341726 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco2g02669 PK_Tyr_Ser-Thr 1.5e-07 CL0016