Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02660 ATGGGTTGCTGCTTTAGTGCTCCTCTAAAGATCAAAGCCGAGAGTCCTCCACGTAATGGTTTGAATTCAAACGATGGTAGTAAAGAAGAGAATGATCCGAGTGGTTTAAGCGGCAAGGTGTCCTCTTCATCTATGCTTCTAACTCCTCAGAGTGAGGATGAGATATTAGAAGCCACCAATTTGAAGAATTTTGCATTCAATGAGCTAAGAACTGCTACAAGGAACTTTCGTCCAGATAGTATGGTAGGCGAAGGTGGGTTTGGTAGTGTGTTTAAAGGGTGGATTGATGAGCATACGCTTGCCCCTACTAAAGCAGGGACAGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAAGCAACCAGGGACACACTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTCAGTCATCCTAATCTTGTGAAGCTAATTGGTTACTCCTTGGAGGATGATCACCGGATTTTGGTGTATGAATTTGTGGCCAAGGGAAGCTTGGATAATCACTTGTTTAGGAGGGCTTCTTACATTCAACCACTCTCTTGGAACATCCGTATGAAGATTGCTCTTGATGCTGCTAAGGGCCTTGCATTTCTTCACAGTGATGAAGTAGATGTAATATTTAGGGACTTCAAAACTTCTAATATCTTACTTGATCCTAACTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAAAATGGACCACAAGGTGACAAGAGTCATGTTTCTACAAGGGTGATGGGCACCTTTGGCTACGCTGCTCCTGAGTATATTGCCACAGGTCACCTAACCAAAAGGAGTGACATATACAGTTTTGGAGTTGTTCTTCTTGAACTTATGTCAGGAAAACGTGCACTGGACGACAACAGGCCAAGTGGGGAGCATAATTTAGTTGAATGGGCCAAACCACTTCTGATAAACAAACACAAGATCTCGCAAGTCATGGATGCACGTATAGAAGGCCAATACTCTAAGCGAGAAGCAAAGAGAATAGCTCACCTTGCAATTCAATGCCTATCTACAGAACAAAAAGTTAGACCAAACATAGAAGATGTGGTGAGATCATTGGAACATCTTCAGGATTCCAATCACACACAAATAAATGGTCATAGCTCTACCAGCAATTCTACTCCTATTTCTAGTTTGTCTCCTTCTCCTCTTCGTACATAG 1176 0.4252 MGCCFSAPLKIKAESPPRNGLNSNDGSKEENDPSGLSGKVSSSSMLLTPQSEDEILEATNLKNFAFNELRTATRNFRPDSMVGEGGFGSVFKGWIDEHTLAPTKAGTGMVIAVKRLNQESNQGHTEWLTEINYLGQLSHPNLVKLIGYSLEDDHRILVYEFVAKGSLDNHLFRRASYIQPLSWNIRMKIALDAAKGLAFLHSDEVDVIFRDFKTSNILLDPNYNAKLSDFGLAKNGPQGDKSHVSTRVMGTFGYAAPEYIATGHLTKRSDIYSFGVVLLELMSGKRALDDNRPSGEHNLVEWAKPLLINKHKISQVMDARIEGQYSKREAKRIAHLAIQCLSTEQKVRPNIEDVVRSLEHLQDSNHTQINGHSSTSNSTPISSLSPSPLRT 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02660 391 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Phco2g02660 391 Gene3D Transferase(Phosphotransferase) domain 1 162 381 - -
Phco2g02660 391 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Phco2g02660 391 MobiDBLite consensus disorder prediction 17 44 - -
Phco2g02660 391 FunFam Serine/threonine-protein kinase PBS1 162 377 - -
Phco2g02660 391 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Phco2g02660 391 FunFam Serine/threonine-protein kinase BIK1 42 161 - -
Phco2g02660 391 SUPERFAMILY Protein kinase-like (PK-like) 61 366 IPR011009 -
Phco2g02660 391 CDD STKc_IRAK 82 361 - -
Phco2g02660 391 MobiDBLite consensus disorder prediction 10 44 - -
Phco2g02660 391 ProSiteProfiles Protein kinase domain profile. 76 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02660 391 MobiDBLite consensus disorder prediction 362 391 - -
Phco2g02660 391 PANTHER OS01G0588500 PROTEIN-RELATED 42 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02660 Phco-Chr2 56257628 56260532 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco2g02660 PK_Tyr_Ser-Thr 6.9e-46 CL0016