Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02648 ATGGGTTTATCCCTAGGACCCTGCACTGATTCCAGGGACCTTTCCAATGCCCCAACCTCTTCCTCCTTAGTTGTAGATCACTACTGTGACTACAATAAGCTCAAATTCAGAACCTTTCTTAGAAAAATGATCTGGGAATTCGGTCTTGCCTGTGTGGCCAACCCTTCCCGACGCCGGAGGAGCTCCGAGAGGGGCCTGAGCGACGGCAAGAAGACGAATTTGGAACACAACAAGGCGTGGTTGCTCGCGGAGTCTGGTGGGTGTGGAGCAGAATTGTCCAATGCTGACCCTCAATCGGTTCACTCCTCTTTCAGGTTCAGTTTCTGTTCTCAGGTTGAGTTGGAGTCCCTCAACATGAGTTCTTCTAGTGCTGCGACCGTTTTGATGGTGAATTTGGACAATGGGGTGAGTGAATCTCGCGCCAAGGAAATCAAATGGAGGAGAATGGAGTCCTTGGAGAAGAGCATATCCCCTGTGGCTCACTCCTTGATCAGGTTCTGCTATGGTGAAATTCTCTCTGCTACTAGGAATTTCTCCAAGGGGAGGGTGTTGGGGAGAGGGGCATTGAGCTGTGTTTTTAGGGGGAGAGTTGGCCTTTTGAGGACTGCTGTGGCAATCAAACGGTTGGACAAGGAAGACAAGGAATCTGCCAAGGCCTTCTGTAGAGAATTGATGATTGCTAGTTCTCTTCACAGTTCAAATGTTGTGCCCCTTGTGGGGTTTTGTATTGATCCCGAGGAGGGTTTGTTTTTGGTGTACAAGTACGTCTCAGGTGGCAGTCTGGAGCGCCACTTGCATGGAAGGAAGAAGGGTAGTTCACCTCTTCCGTGGTCTGTGAGGTACAAAGTTGCAATCGGGATTGCTGAAGCTGTGGCTTATCTTCATAGTGGAACTGAAAGATGTGTTGTGCACAGAGACATTAAGCCCTCAAACATTCTGCTTTCTTCAAGGAAGACTCCCAAGCTATGTGATTTCGGATTAGCTACATGGACTTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACCGTCAAAGGAACATTTGGATATTTGGCTCCTGAGTATTTTCAACATGGGAAAGTATCGGATAAGACTGATGTATATGCTTTTGGAGTGGTTTTACTGGAACTCATTACTGGCCGGAAGCCAATTGAGGCAAGAAGACCTTCAGGAGAAGAAAACTTGGTCTTATGGGCCAAACCTTTTCTACAGAAAGGGAAAGGTGCCATTGAAGAGTTGCTTGATCCTCAACTCAAGTGCAGTCTGAGATTCTCAAATCAAATGGGTAGAATGATTGAAGCAGCAGGTGCTTGTGTCACAAATGAAGAATCTCGGAGACCTGGCATACGTGAGATTATTGCAATACTGAAGGGTGAAGAAGAGCCTATTTTGTCTAAAAGAAAGAAATCCAGTTTTCTTGGAAATGGTTGCGTGATTGATTGTTATTCTCAGTTAGAACAAACAAATAATGAGATGAAAAGTCACTTGGCTTTAGCAATGCTAGGAGTTGCAGAGTTTGAGGATGATGACTATCTCTATGGTCGATAA 1545 0.4589 MGLSLGPCTDSRDLSNAPTSSSLVVDHYCDYNKLKFRTFLRKMIWEFGLACVANPSRRRRSSERGLSDGKKTNLEHNKAWLLAESGGCGAELSNADPQSVHSSFRFSFCSQVELESLNMSSSSAATVLMVNLDNGVSESRAKEIKWRRMESLEKSISPVAHSLIRFCYGEILSATRNFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESAKAFCRELMIASSLHSSNVVPLVGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGSSPLPWSVRYKVAIGIAEAVAYLHSGTERCVVHRDIKPSNILLSSRKTPKLCDFGLATWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEARRPSGEENLVLWAKPFLQKGKGAIEELLDPQLKCSLRFSNQMGRMIEAAGACVTNEESRRPGIREIIAILKGEEEPILSKRKKSSFLGNGCVIDCYSQLEQTNNEMKSHLALAMLGVAEFEDDDYLYGR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02648 514 SUPERFAMILY Protein kinase-like (PK-like) 161 458 IPR011009 -
Phco2g02648 514 PANTHER OS08G0249100 PROTEIN 109 470 IPR046958 -
Phco2g02648 514 ProSiteProfiles Protein kinase domain profile. 178 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02648 514 Gene3D Transferase(Phosphotransferase) domain 1 256 470 - -
Phco2g02648 514 FunFam Putative receptor-like serine/threonine-protein kinase 256 471 - -
Phco2g02648 514 Pfam Protein kinase domain 179 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02648 514 Gene3D Phosphorylase Kinase; domain 1 137 255 - -
Phco2g02648 514 FunFam probable serine/threonine-protein kinase PBL7 139 255 - -
Phco2g02648 514 SMART serkin_6 178 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02648 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02648 Phco-Chr2 56162482 56165139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Phco2g02648 Pkinase 1.1e-44 CL0016