Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02646 ATGGACGAAGAGGTGCGCAAGATCTTCAACAAGTTCGACAAGAACGGCGACGGGAAGATCTCGTGCTCGGAGCTGAGGGAGCTGATGGCGGCGCTGGGATCAAAAACTACCACGGAGGAGGTGCGGCGCATGATGGCGGAACTCGACCGGAACGGCGACGGCTACATTGATTTGAAGGAGTTCGGGGAGTTTCACTGCGGCGGAGGCGGAGGCGACGGGAGGGAGCTCCGGGAGGCGTTCGAGCTGTACGATCTGGACAAGAACGGGCTGATCTCGGCAAAGGAGCTGCACTCCGTGATGCGGAGGTTGGGGGAGAAGTGCTCCCTCAGTGACTGCCGGAGAATGATAGGAAACGTGGATGCCGACGGCGACGGCAACGTGAATTTCGAAGAGTTCAAGAAGATGATGACGCGCTCGTAG 420 0.5905 MDEEVRKIFNKFDKNGDGKISCSELRELMAALGSKTTTEEVRRMMAELDRNGDGYIDLKEFGEFHCGGGGGDGRELREAFELYDLDKNGLISAKELHSVMRRLGEKCSLSDCRRMIGNVDADGDGNVNFEEFKKMMTRS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02646 139 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Phco2g02646 139 CDD EFh 4 61 IPR002048 GO:0005509
Phco2g02646 139 ProSitePatterns EF-hand calcium-binding domain. 84 96 IPR018247 -
Phco2g02646 139 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 75 137 - -
Phco2g02646 139 FunFam Calmodulin 1 1 67 - -
Phco2g02646 139 Gene3D - 72 139 - -
Phco2g02646 139 Pfam EF-hand domain pair 75 137 IPR002048 GO:0005509
Phco2g02646 139 Pfam EF-hand domain pair 3 62 IPR002048 GO:0005509
Phco2g02646 139 CDD EFh 75 137 IPR002048 GO:0005509
Phco2g02646 139 ProSiteProfiles EF-hand calcium-binding domain profile. 36 70 IPR002048 GO:0005509
Phco2g02646 139 SUPERFAMILY EF-hand 3 138 IPR011992 -
Phco2g02646 139 ProSiteProfiles EF-hand calcium-binding domain profile. 107 139 IPR002048 GO:0005509
Phco2g02646 139 Gene3D - 1 67 - -
Phco2g02646 139 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Phco2g02646 139 FunFam Probable calcium-binding protein CML27 69 139 - -
Phco2g02646 139 ProSiteProfiles EF-hand calcium-binding domain profile. 71 106 IPR002048 GO:0005509
Phco2g02646 139 SMART efh_1 4 32 IPR002048 GO:0005509
Phco2g02646 139 SMART efh_1 111 139 IPR002048 GO:0005509
Phco2g02646 139 SMART efh_1 40 68 IPR002048 GO:0005509
Phco2g02646 139 SMART efh_1 75 103 IPR002048 GO:0005509
Phco2g02646 139 ProSitePatterns EF-hand calcium-binding domain. 120 132 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02646 Phco-Chr2 56153997 56154416 Dispersed/Wgd