Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02631 ATGCTGTCTTCCAAGAGGATTGAGTTAGTGGAGTATCTCACGCTTCCAACCCAAGCAAAGAAGTTCGATGATGTGGCGTTTTCTGATGAAGACGTAGCACGTGTGGACCGTGTCACATCCCTGCACAACACGAACTCTAAGTCTTCCTTCCTCTCTCTATATATCAATATTAATCTGAAGCCTCTAGTTTTGAGGGATCAATTCCAGATTCCAGGTACACTTTGTTGGCATTTGAGTTCTGGTGAACACAAAATGGGAAGACAACCTTGCTGTGACAAAGTGGGGTTGAAGAAGGGTCCATGGACTGCAGAGGAGGATAAGAAACTCATCAACTTCATCCTCACTAATGGCCAATGTTGCTGGAGAGCTGTCCCTAAACTAGCAGGGCTGTTAAGGTGTGGCAAAAGTTGCAGGCTCAGATGGACAAATTACCTAAGGCCAGACCTGAAGAGAGGCCTTTTATCAGAATATGAAGAGAAAATGGTCATTGATCTCCATGCTCAACTTGGCAATAGGTGGTCTAAGATTGCTTCTCATCTCCCCGGAAGAACTGATAATGAGATCAAGAATCACTGGAACACTCACATAAAGAAAAAGCTCAAAAAAATGGGAATTGATCCTGTTACCCACAAGTCACTTTCCATTACAAATGAGCAAATCCAAGCCCAATCAGATCAACAACCCCATCAGCCATTGCAAGAACAACATCAACAACATCAGCAACAAGCTATCCAAGTTGAGGAAAACCCCAAATTTGTGCCTGAAAGTGAGCAAAACAAGGAGCCAGAGACTTCATTTGAATTATCAAGCATAACTGAAGAAGCTAAGGAGGAAGACCAACTCATGACGCCCCTTTTTGACTCCATGGAACTAATGAATGAGTTCTGCACTGATGAAGTTCCCATAATAGAAGCCAGTGAGATATTAGTTCCATCTGCTACTTCCACTTCACCAACCACTACTACATCATCTTCAACATCATCATCTTCTTATTCAAATTCCCCCAACTTCTTTGAAGACCTGCTGCTCCCAGATTTTGACTGGTCCGATGATTACAATGATACTAAGATTGACAATAACAATAGCAGTATGGCCTTGTGGGATGATGACTTGATTAGAAGTTGGAATTTGCTTATTAATGATGATGGTGATGGTGACAGAAAGCAAGTGTTTGACACTCCAGTCAATCAGTACCCAAGAGTTATCATGGATTCAGAATCTTGGGCATATGGGTTGTTTTGA 1242 0.4219 MLSSKRIELVEYLTLPTQAKKFDDVAFSDEDVARVDRVTSLHNTNSKSSFLSLYININLKPLVLRDQFQIPGTLCWHLSSGEHKMGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMGIDPVTHKSLSITNEQIQAQSDQQPHQPLQEQHQQHQQQAIQVEENPKFVPESEQNKEPETSFELSSITEEAKEEDQLMTPLFDSMELMNEFCTDEVPIIEASEILVPSATSTSPTTTTSSSTSSSSYSNSPNFFEDLLLPDFDWSDDYNDTKIDNNNSSMALWDDDLIRSWNLLINDDGDGDRKQVFDTPVNQYPRVIMDSESWAYGLF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02631 413 CDD SANT 158 196 IPR001005 -
Phco2g02631 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 146 200 IPR017930 -
Phco2g02631 413 Gene3D - 95 151 - -
Phco2g02631 413 SUPERFAMILY Homeodomain-like 95 192 IPR009057 -
Phco2g02631 413 ProSiteProfiles Myb-like domain profile. 146 196 IPR001005 -
Phco2g02631 413 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 85 305 - -
Phco2g02631 413 MobiDBLite consensus disorder prediction 312 333 - -
Phco2g02631 413 MobiDBLite consensus disorder prediction 219 276 - -
Phco2g02631 413 ProSiteProfiles Myb-like domain profile. 93 145 IPR001005 -
Phco2g02631 413 MobiDBLite consensus disorder prediction 219 247 - -
Phco2g02631 413 SMART sant 150 198 IPR001005 -
Phco2g02631 413 SMART sant 97 147 IPR001005 -
Phco2g02631 413 CDD SANT 100 145 IPR001005 -
Phco2g02631 413 FunFam MYB transcription factor 95 151 - -
Phco2g02631 413 Pfam Myb-like DNA-binding domain 98 145 IPR001005 -
Phco2g02631 413 Pfam Myb-like DNA-binding domain 155 195 IPR001005 -
Phco2g02631 413 FunFam Myb transcription factor 155 217 - -
Phco2g02631 413 Gene3D - 155 200 - -
Phco2g02631 413 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 145 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02631 Phco-Chr2 56037761 56042037 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco2g02631 Myb_DNA-binding 1.3e-12 CL0123