LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco2g02608	ATGCCCTTGGAAGGGATTTTCATTGAACCTACTTCAACTTCTACGCCTGATCTTTCCCTTCACATAAGTCCACCAAGCACATCATCTTCCTCTTCTCTGATTTGCAACAACACCACATCTGGTGGTGCCACCCACTATGAGGCTCACAATTCAACAAGCACAAATTTCCCTTCTCAAGCTCATACCGAGCTTTCTTTGGGAAGGAATTTCAGTGGTGGAGGAAGAGGAGGTATTCATGAACGGCCAACACACAACAGCAGCAGCAGCATCAACCCTTATTATCAAACACAACAGGCTCATTTCCATCATCTTCAAAACCATTCTAGCACTTGGAATGCTTCAAAAGCAGCAACAACAACAAGCACCACAAGTTCCTCTGATCACTTGGCTCACATAAATTATGGGGTTTCTTTGCTTGATGTGTCATCAGAAGGATTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTTCTTGCCCATGGAACACTCGGGAGACAAGGATCATCATGCCAAAATGTGTTTATATCATCACATGCCTACATATCCCTCTTTGTCCTCCTCTTGTTCGCCTCTGTGTTCTTCTTCTTCTTTTACTTCTTCTCCTACACCCTACTTTGCCGCAGCGGCAGGTAGCCCGGATCCCATGACCTATTTGAGCTCCGGTGGGACCACCGTTGCGGCGGCCGCGGCTTATAGGGCTGCCACAGCCACAAGGTTTAATGGAATTTCTGGGGAGACCTTCAAATCCCATCATCCATTGCACCACCATCACTCATCATCACACTATGGGGTTGGACTTGGAGCCTCTCATGAGGCCTCTTCAGGGTTGATGAGATCAAGGTTTTTGCCCAAGTTGCCAACAAAGAGAAGCATGAGAGCACCGAGAATGCGGTGGACAAGCACACTACACGCTCGATTTGTCCATGCTGTGGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTAGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTGAAGACCACTGACAAGCCTGCTGCTTCTTCAGGCCTTTCAGATGGATCAGGAGAAGATGACATGTCTCCAATGGGAAGCAGCGGTGGTATGCGTCAATTTTCAGATCAAAGAAGCCTTTCAGATCGAGCAGTGCAACAAGATATGGATTACTCTTCCGCCAATACTCTATGGAGTAACTCTTCAAGCAATAGAGAACCATGGCCACAAAACAGTTCTAACGACATAAATGGTTTCCGACCCCCGATCTTCCAGTCACAACAAATATCAGGAGGGCATCAAATTCAGGATTGTGATTCAAGCCAACTGAAGAACAGCTTGTCAGGATCATCAAATTTAGAATGCAAGAACCCAAGCTTGGAGTTCACATTAGGGAGACCAGATTGGAATGGCAAAGGACAAGCCTAA	1464	0.4658	MPLEGIFIEPTSTSTPDLSLHISPPSTSSSSSLICNNTTSGGATHYEAHNSTSTNFPSQAHTELSLGRNFSGGGRGGIHERPTHNSSSSINPYYQTQQAHFHHLQNHSSTWNASKAATTTSTTSSSDHLAHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPMEHSGDKDHHAKMCLYHHMPTYPSLSSSCSPLCSSSSFTSSPTPYFAAAAGSPDPMTYLSSGGTTVAAAAAYRAATATRFNGISGETFKSHHPLHHHHSSSHYGVGLGASHEASSGLMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDMSPMGSSGGMRQFSDQRSLSDRAVQQDMDYSSANTLWSNSSSNREPWPQNSSNDINGFRPPIFQSQQISGGHQIQDCDSSQLKNSLSGSSNLECKNPSLEFTLGRPDWNGKGQA	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco2g02608	487	MobiDBLite	consensus disorder prediction	8	36	-	-
	Phco2g02608	487	MobiDBLite	consensus disorder prediction	1	36	-	-
	Phco2g02608	487	SUPERFAMILY	Homeodomain-like	296	352	IPR009057	-
	Phco2g02608	487	MobiDBLite	consensus disorder prediction	64	91	-	-
	Phco2g02608	487	PANTHER	TRANSCRIPTION FACTOR KAN2-RELATED	16	484	IPR044847	GO:0000976\|GO:0006355\|GO:0010158
	Phco2g02608	487	NCBIfam	myb-like DNA-binding domain, SHAQKYF class	299	352	IPR006447	GO:0003677
	Phco2g02608	487	Gene3D	-	298	355	-	-
	Phco2g02608	487	MobiDBLite	consensus disorder prediction	354	487	-	-
	Phco2g02608	487	MobiDBLite	consensus disorder prediction	380	470	-	-
	Phco2g02608	487	FunFam	Myb family transcription factor	297	355	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco2g02608	Phco-Chr2	55854782	55860672	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GARP-G2-like	Phco2g02608		None	None	None