Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02579 ATGTCTAACACCAGTAACAATGTCGCTGGGGTTGACAACACTTTCAGAAGAAAATTTGATCGAGAAGAGTACCTGGAACGAGCACGGGAGCGCGAGAGACAGGAGGAGGAGGGTCGATCGAAACCTAAAGCTAAAGGTCCTCCCGTGCAGAGGAAGCCCTTGAAGCACAGAGATTATGAAGTGGACCTTGAATCTCGCTTGGGCAAGACTCAGGTTGTTACACCGGTTGCACCACTAAGTCAGCAGGCTGGATACTACTGCTCAGTTTGTGAATGTGTGGTTAAGGACTCGGCAAACTACTTGGATCATATTAATGGAAAGAAACATCAAAGAGCCTTGGGCATGTCTATGCGAGTAGAACGTGCTTCTCTCAAACAGGTTCAGGAACGATTTGAAGTTCTTAAGAAACGAAAAGATGTTGGTAGCTTCACAGAGCAAGATCTTGATGAGCGGATTTTGAAACAACAACAAGAAGAGGAAGAAAAAAAGCGTCTACGAAGAGAAAAGAAGAAAGAAAAGAAGGAGAAGGCAGTGGAAGAACCTGAAATCGATCCGGATGTTGCTGCCATGATGGGTTTTGGGGGTTTCCGGTCATCCAAGAAGTGA 606 0.4571 MSNTSNNVAGVDNTFRRKFDREEYLERARERERQEEEGRSKPKAKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLKQVQERFEVLKKRKDVGSFTEQDLDERILKQQQEEEEKKRLRREKKKEKKEKAVEEPEIDPDVAAMMGFGGFRSSKK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02579 201 Pfam Zinc-finger of C2H2 type 85 109 - -
Phco2g02579 201 MobiDBLite consensus disorder prediction 157 201 - -
Phco2g02579 201 MobiDBLite consensus disorder prediction 20 44 - -
Phco2g02579 201 Coils Coil 148 180 - -
Phco2g02579 201 SMART ZnF_U1_5 82 116 IPR003604 GO:0003676|GO:0008270
Phco2g02579 201 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 4 201 IPR040107 GO:0000398|GO:0005681
Phco2g02579 201 MobiDBLite consensus disorder prediction 20 56 - -
Phco2g02579 201 Gene3D Classic Zinc Finger 79 117 - -
Phco2g02579 201 MobiDBLite consensus disorder prediction 157 183 - -
Phco2g02579 201 FunFam zinc finger matrin-type protein 2-like 79 117 - -
Phco2g02579 201 SUPERFAMILY beta-beta-alpha zinc fingers 80 123 IPR036236 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco2g02579 zf-C2H2_jaz 1.8e-06 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02579 2 55611275 55613950 Phco2g02579 2 55611275 55613950 ECH