Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phco2g02573 | ATGGAAGCACTTTACAGGTTCAAACCTCTTCTGCCTTCTCTCCAGGATATGCGTCTCGGAACAACACCTAATTCTTACCTCCAGCTAGAAGCACCTCAACCCAACGTAACCCACTCAGATATGACGGATCGGATCATCAAGATCCAGATCGCCAATCACCCTCTTTATCCAGATTTACTCTCTGCATACATAGAATGCCAAAAGGTTGGAGCGCCGCCGGAACTGGCATGCCTTCTTGAAGAAATAGGCCGAGAAAGCCACCGCATGAATGCTCGCCTTCAGAAAGGGGACGGTCCTGAACTTGACCACTTCATGGAAATGTACTGCGATTTGCTTCGTAGACACAAGGAGGAGTTGTCCAGACCCTTCAATGAAGCGACTTTGTTTCTGGGAAACATGGAATCACAACTAAGCAACCTTTGTAATGGAACACTGATAAAGTCATCAGATAACAACCACTCCGATGAAGTAGCTGGTGGAGCATCAGAGGAAGAAATAAGTTGTGGAGAGATGGAAGAAGTTGAAGGTGATCAAAATCTTAAAGAGATGCTCCTTCGCAAGTACAGTGGCCATTTTAGCGGTTTGAGAAAGGAATTTCTAAAACGAAGAAAAAAGGGTAAGCTACCAAAGGATGCAAAGACGGCACTCATGAACTGGTGGAACACCCATCATCGATGGCCATATCCTACGGAGGAGGAGAAAGTGAAGTTAACAGAAGTGACTGGACTGGATCAAAAGCAGATAAATAATTGGTTCATCAATCAGAGAAAACGGCATTGGAAACCAACTGAGGACATGCGATTTGCCGTTATGGATGGGTTAAGTGGCGGCGGTGGCATCATAGGAGGAGCTATGTTCTTTTAG | 864 | 0.4549 | MEALYRFKPLLPSLQDMRLGTTPNSYLQLEAPQPNVTHSDMTDRIIKIQIANHPLYPDLLSAYIECQKVGAPPELACLLEEIGRESHRMNARLQKGDGPELDHFMEMYCDLLRRHKEELSRPFNEATLFLGNMESQLSNLCNGTLIKSSDNNHSDEVAGGASEEEISCGEMEEVEGDQNLKEMLLRKYSGHFSGLRKEFLKRRKKGKLPKDAKTALMNWWNTHHRWPYPTEEEKVKLTEVTGLDQKQINNWFINQRKRHWKPTEDMRFAVMDGLSGGGGIIGGAMFF | 287 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phco2g02573 | 287 | SMART | KNOX2_2 | 91 | 142 | IPR005541 | GO:0003677|GO:0005634 | |
Phco2g02573 | 287 | ProSiteProfiles | ELK domain profile. | 179 | 199 | IPR005539 | GO:0003677 | |
Phco2g02573 | 287 | SMART | ELK_2 | 179 | 200 | IPR005539 | GO:0003677 | |
Phco2g02573 | 287 | Pfam | Homeobox KN domain | 219 | 258 | IPR008422 | GO:0003677|GO:0006355 | |
Phco2g02573 | 287 | Pfam | KNOX1 domain | 46 | 87 | IPR005540 | GO:0003677|GO:0005634 | |
Phco2g02573 | 287 | Gene3D | - | 197 | 270 | - | - | |
Phco2g02573 | 287 | SUPERFAMILY | Homeodomain-like | 201 | 274 | IPR009057 | - | |
Phco2g02573 | 287 | ProSiteProfiles | 'Homeobox' domain profile. | 199 | 262 | IPR001356 | GO:0003677 | |
Phco2g02573 | 287 | CDD | homeodomain | 202 | 262 | IPR001356 | GO:0003677 | |
Phco2g02573 | 287 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 57 | 269 | - | - | |
Phco2g02573 | 287 | Pfam | ELK domain | 180 | 200 | IPR005539 | GO:0003677 | |
Phco2g02573 | 287 | Pfam | KNOX2 domain | 96 | 141 | IPR005541 | GO:0003677|GO:0005634 | |
Phco2g02573 | 287 | SMART | HOX_1 | 201 | 266 | IPR001356 | GO:0003677 | |
Phco2g02573 | 287 | SMART | KNOX1_2 | 44 | 88 | IPR005540 | GO:0003677|GO:0005634 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phco2g02573 | Phco-Chr2 | 55563773 | 55568423 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-KNOX | Phco2g02573 | KNOX2 | 5.4e-21 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Phco2g02573 | 2 | 55563773 | 55568423 | Phco2g02573 | 2 | 55563773 | 55568423 | ECH | |
Phco2g02573 | 2 | 55563773 | 55568423 | Phco6g01284 | 6 | 12886971 | 12891522 | PCT |