Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02566 ATGGCAGACTTGGAAAACATGCTGCTTGAGGCAGCTGGAAGGACTAGTTCTCCGGTGAGAAAACGGCACAAGCCTCGGAACTCCAAATCCAAATGTGAGGGTGGTGCGGCATTCTCTGATGGAGGAAGTAATTCTAGAGAAGAAGACTCTGATGAGGGTGCAAACAAGAAACCACAGAGGTATTCATCCCATGTTCCACTGAAGAAGAGATTAGACGTCAGCAGAAGAAGTAGTAATAATAGTATTCGCAATGAGCATGGTGGGGGTGACTTGGAGGACGGAGTTCCCGATAGAGATGGTGGCAGCAGTGAAGAATCTGACGTTGGCAGTGATCTCTACAAGAACGAAGACGACAAACAAAAGCTCGCAAATATGACAGAACTTGAAAGGGAGATGATTTTGTCTGATAGAGCAACCAAAAAATGTGACAAGGAATTCAAAGAGAAAATGAGATTGAAGAGGGAAAACAAAAATGCAAGTGCAAAGACTAGTTCTGCAGCAAATTCATCTCATCACCCATCATCTGCCAAGGTTCGTTCCTCGGCTAGACATGCCGAGAGGACGGCTTCCAAGGGAGATGTTCTAAGTGAATTGCGCGCGAAAAGGATGAAGCAACAAATCTTAGACCCTCACGATAAATTGGGAAAGGCTTCAGCATCAGGCTCAAGTGGCAAGCAGAAATCTGGGGTCACGGCAAGTCCAAGTAGCTCTAGTCAGAGTGAGAGTGTTATTCGGTCTGACAGTGAAAGAGACTCATCTGATGATGGTGGATTGGGTGACAGTGATGATGACAAGAACATTCATGAGTCAAAGATGCCAACATTTGAGAACATAAGGGAAATCACCATTAGGAGGTCAAAGCTTGTGAAGTGGTTAAATGAACCATTTTTTGAGGAGTTAATTGTTGGATGTTTCGTGAGAATTGGCATAGGAAAGTCAGAAAGTGGACCTGTTTACAGACTCTGCATAGTGCAGAGAGTAGATGGAGGTGACCCAAATAAGCATTATAAGGTAGAGAATAGAGTTACTCACAAGTATCTAGTTTGTGTGTGGGGCAGTGAGAACTCTGCTAAAAAGTTTCAGGTGGCTGTAATTTCAGATTCTGCCCCCTTGGAGAGAGAGTTCAGACATTGGGTTAGAGAAGTTGAAAGAACTGGCAGCCAACTGCCGAGTAAGATGAGTGTGTTGGAGAAGAAGGAGGCCATAAGAAGAACAAGCGCGTATGTTTATTCAGCTGCCACTGTGAAGCAGATGCTAGAGGAGAAAAAATCAGCCCCGTCTAGGCCACTGAACATTGCAGTGGAGAAGGATCGTTTGAAGAATCTGTTGGAGGTTGCAAAATGTAAGAATGATGAAGCAGAGATGGATAGGATCTTGAGAAAGCTCGCGGATTTGGAAGCATCTCGTAAATCCCGGGAGAATGATACCAAGGCTTTGAGGCTGGCCGAGATGAACAGGAAGAACAAGGTTGCGAACTTCAAGAACTTGTCTGAACATAAACAGTTCAATGCAAATTTGAAAGCTGGTGAGGAAGGCTATGATCCCTTTTCGAGGAGGTGGACAAGATCAAGGAATTACTACGGTAAAGATACTGAAAAGAATGAAGATAAAGGAGAAAAGGATGGTGAAGTTAGTAAGGGGGAAGAGAAAGAAGGAGAAGCTGTTACAACAAAGGCTGGTGTTGAAGTAACAGAATTGGCATTGCAAGCAGCTGCTGAAGAAGGAAAGTTGATTGATACTAATGCTCCTGTGGATGGTGGAACAGAATTAAACATGCTGCATGATTTCAACTTGCCTATCTCTCTGGCTGAACTCAAGAATTTCGGTGGACCACAGGGACTCAAAAATGGATTTCTGGCAAGGAAACAAAAAATAGAAGCAACTGTTGGGTGCCGGGTTTCTGAGAATGATGGGAGTAGGCATGCACTTACATTAACTATCAGTGACTACAAGAGAAGAAGAGGACTTCTGTGA 1974 0.4402 MADLENMLLEAAGRTSSPVRKRHKPRNSKSKCEGGAAFSDGGSNSREEDSDEGANKKPQRYSSHVPLKKRLDVSRRSSNNSIRNEHGGGDLEDGVPDRDGGSSEESDVGSDLYKNEDDKQKLANMTELEREMILSDRATKKCDKEFKEKMRLKRENKNASAKTSSAANSSHHPSSAKVRSSARHAERTASKGDVLSELRAKRMKQQILDPHDKLGKASASGSSGKQKSGVTASPSSSSQSESVIRSDSERDSSDDGGLGDSDDDKNIHESKMPTFENIREITIRRSKLVKWLNEPFFEELIVGCFVRIGIGKSESGPVYRLCIVQRVDGGDPNKHYKVENRVTHKYLVCVWGSENSAKKFQVAVISDSAPLEREFRHWVREVERTGSQLPSKMSVLEKKEAIRRTSAYVYSAATVKQMLEEKKSAPSRPLNIAVEKDRLKNLLEVAKCKNDEAEMDRILRKLADLEASRKSRENDTKALRLAEMNRKNKVANFKNLSEHKQFNANLKAGEEGYDPFSRRWTRSRNYYGKDTEKNEDKGEKDGEVSKGEEKEGEAVTTKAGVEVTELALQAAAEEGKLIDTNAPVDGGTELNMLHDFNLPISLAELKNFGGPQGLKNGFLARKQKIEATVGCRVSENDGSRHALTLTISDYKRRRGLL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02566 657 MobiDBLite consensus disorder prediction 159 176 - -
Phco2g02566 657 MobiDBLite consensus disorder prediction 1 271 - -
Phco2g02566 657 MobiDBLite consensus disorder prediction 219 243 - -
Phco2g02566 657 FunFam RNA polymerase-associated protein RTF1 273 405 - -
Phco2g02566 657 Pfam Plus-3 domain 277 382 IPR004343 GO:0003677
Phco2g02566 657 SUPERFAMILY Plus3-like 274 403 IPR036128 GO:0003677
Phco2g02566 657 MobiDBLite consensus disorder prediction 179 211 - -
Phco2g02566 657 Coils Coil 436 475 - -
Phco2g02566 657 MobiDBLite consensus disorder prediction 86 158 - -
Phco2g02566 657 ProSiteProfiles Plus3 domain profile. 272 407 IPR004343 GO:0003677
Phco2g02566 657 SMART rtf1 272 384 IPR004343 GO:0003677
Phco2g02566 657 Gene3D - 272 405 IPR036128 GO:0003677
Phco2g02566 657 PANTHER UNCHARACTERIZED 222 656 - -
Phco2g02566 657 MobiDBLite consensus disorder prediction 528 556 - -
Phco2g02566 657 Coils Coil 142 162 - -
Phco2g02566 657 MobiDBLite consensus disorder prediction 44 58 - -
Phco2g02566 657 MobiDBLite consensus disorder prediction 244 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02566 Phco-Chr2 55474954 55476927 Dispersed