Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02550 ATGGGGTCTAGTCTTAGTGCTGAATTGTCCAAGAAAACTCCCATTTTTGGTCTAAAAGTTTGGGAAATAATTGGAATTGTAGTTGGTTTGTCAATAATAGTTATTCTTTCTGTGGTCTCACTTTGCCTCACGTCAAGGAAGAAATCTGGAAAAGAGAAAGACAGGATTCCCCTTACTCAAATACCAACTGTCTCAAAGGAAATCAAGGAAGTTCGGGTTGAACAAGTGCCAACTAATGTATTTGCTCCTTGTGATGGAATACTTCTCACAATTCGGGACAAGTCCAGTGGCAAGGAATCAGACAATGTCATGGTTCATTTAGGTCTGGGGAAGATGAAGAATGGGAATAGCAACACTCACTCAGATTCATTTCGTTACACAGAGAAAGATGGAAGCGGTTCACACTCACAGTCCGGAGAAGAAGGTAGCTCTGGCACGTTTACAGTGTACAAGCAATCTTCTTCACACCCTTTAACAGCTCCCTCACCTCTATCTGGCCTTCCGGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACCTTGAGGGATCTTGAGCTTGCCACTAACCGTTTTTCCAAAGAAAATGTCCTCGGTGAAGGTGGGTATGGAGTAGTTTATAGGGGGCAGTTGGTCAATGGAACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGCCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAAAACTTGGTTCGCCTTTTGGGGTTCTGCGTTGAGGGAACCCACAGGATGTTGGTTTATGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGCCACCATGGATACCTTACCTGGGAAGCACGTATCAAGATTCTGCTTGGCACAGCCAAAGCGCTAGCATACTTGCATGAAGCAATTGAACCGAAGGTGGTACACCGTGATATCAAGTCAAGCAACATATTAATTGATGATGATTTCAATGCCAAGGTTTCAGACTTTGGCCTGGCCAAGTTATTGGGTGCTGGGAAGAGTTATATCACTACAAGAGTTATGGGAACTTTTGGATACGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAGAAGAGTGATGTTTATAGCTTTGGTGTTTTGCTATTGGAAGGAATTACTGGAAGAGATCCAGTTGACTATGGTCGACCAGCAAATGAAGTGAACCTGGTTGATTGGCTGAAGATGATGGTTGGAAATAGGAGATCAGAAGAAGTGGCGGACCCCAACATTGAGGTGAAGCCATCCACTAGAGCTTTAAAACGGGCTCTCTTAACCGCTTTAAGATGTGTAGATCCAGATTCTGAGAAAAGGCCCAAGATGGGCCAAGTTGTTCGTATGCTCGAGTCAGAAGAATATCCTTTACCAAGAGAGGACCGAAGACACCGAAGAAGAAATAGAGGGGGTAGTGGAGAAATAGAGTCCCAGAAGGAGTATTCTGACACAGACAGGAGTGAGATTCAGGATTCGAGAGAAGAAAGAAGAGGGTGA 1533 0.4377 MGSSLSAELSKKTPIFGLKVWEIIGIVVGLSIIVILSVVSLCLTSRKKSGKEKDRIPLTQIPTVSKEIKEVRVEQVPTNVFAPCDGILLTIRDKSSGKESDNVMVHLGLGKMKNGNSNTHSDSFRYTEKDGSGSHSQSGEEGSSGTFTVYKQSSSHPLTAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLVNGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCVEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSYITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPANEVNLVDWLKMMVGNRRSEEVADPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLPREDRRHRRRNRGGSGEIESQKEYSDTDRSEIQDSREERRG 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02550 510 CDD STKc_IRAK 197 463 - -
Phco2g02550 510 SMART serkin_6 191 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02550 510 ProSitePatterns Protein kinases ATP-binding region signature. 197 220 IPR017441 GO:0005524
Phco2g02550 510 Gene3D Phosphorylase Kinase; domain 1 172 266 - -
Phco2g02550 510 PANTHER OS01G0323000 PROTEIN 4 491 - -
Phco2g02550 510 MobiDBLite consensus disorder prediction 110 160 - -
Phco2g02550 510 Gene3D Transferase(Phosphotransferase) domain 1 267 477 - -
Phco2g02550 510 FunFam Putative receptor-like serine/threonine-protein kinase 267 478 - -
Phco2g02550 510 ProSiteProfiles Protein kinase domain profile. 191 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02550 510 MobiDBLite consensus disorder prediction 461 510 - -
Phco2g02550 510 MobiDBLite consensus disorder prediction 130 160 - -
Phco2g02550 510 SUPERFAMILY Protein kinase-like (PK-like) 175 470 IPR011009 -
Phco2g02550 510 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco2g02550 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Phco2g02550 510 FunFam Putative receptor-like protein kinase 173 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02550 Phco-Chr2 55365354 55368918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco2g02550 Pkinase 2.3e-47 CL0016