Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g02521 | ATGTCGCAGATACCGAAGGAGCCGGAGCAGGTGATGAAGATGAGAGGAGGAGGTGTCTTGGGGAAGAGAACGATTCTGAAGAGCGACCATTTCCCTGGTTGCCAGAACAAACGTTTGTCGCCTCAGATCGAAGGCGCTCCCAATTATCGACAGGCATCGGACTCGTTGCATGTTCACGGTGTTGCCATTCCAACCATTGATGGAATTCGAAACGTTCTCGACCACATTGGTGCTCGATTGAAAGTTCTCTGGATTAGCCTTCGTGAGGAACCGCTTGCCTACATTAATGGTCGTCCTTTTGTTTTGCGTGATGTGGAGAGGCCGTTCTCCAACCTTGAGTATACGGGAATTAACAGAGAAAGGGTGGAGCAAATGGAAGCTCGTTTGAAAGAAGACATCCTGGTGGAGGCAGCAAGATATGGAAATAAGATTCTTGTGACTGATGAACTGCCAGATGGGCAGATGGTGGACCAATGGGAGCCGGTGTCATGTAATTCTGTGAAGACACCACTAGAGGTGTATGAGGAATTGCAAGTAGCGGGATATCTTGTTGATTATGAACGCGTTCCTATAACTGATGAAAAATCTCCAAAGGAAATGGATTTTGATATCTTGGTTAATAAAATTTCTCAAGCTGATGTAGACACGGAGATAATTTTTAATTGTCAAATGGGGCGTGGTCGAACCACAACTGGAATGGTCATTGCAACTTTGATCTACCTCAACCGAATAGGGGCCTCTGGATTTCCAAGAAGCAATTCAATTGGTAGAATTTTTCAAAGTATGACCAATGGTGCTGATCATTTGCCTGACTCGGAAGAAGCAATACGCAGAGGAGAGTATGCTGTCATAAGAAGCTTGATTCGGGTGTTAGAGGGTGGTGTTGAGGGGAAAAGACAAGTAGACAAAGTCATTGACAAATGTGCTTCAATGCAGAACCTGCGCGAAGCAATTGCCACGTATCGCAATAGTATTTTGCGGCAGCCCGATGAGATGAAAAGGGAGGCATCACTATCTTTTTTTGTTGAGTACCTGGAGAGATACTACTTTTTAATATGCTTTGCTGTGTACATTCATTCAGAAAGGGCTGCACTCCGTTCTAATACAGCTGATAACTGTAGCTTTGCTGACTGGATGAGAGCAAGGCCTGAACTTTACAGCATTATTCGCAGGTTACTTAGGAGAGATCCAATGGGTGCACTTGGTTATTCAAGTTTGAAGCCATCTCTAAAGATGATAGCTGAATCCACGGATGGCCGCCCGTCTGAGATGGGTGTGGTTGCTGCTTTGAGAAATGGAGAGGTTCTTGGTAGTCAAACTGTTCTCAAAAGTGATCACTGTCCTGGATCTCAAAACCCAAGTTTGCTTGAGAGTGTGGATGGTGCTCCTAATTTCCGAGAAGTTCCTGGATTTCCTGTTTATGGAGTGGCAAATCCAACAATTGATGGTATTCGATCTGTCATCCGGAGGATAGGAAGTTCTGAAGGTGGACACCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGGCCATACAAAAACATGCTGGAGTACACGGGCATTGACCGTGAAAGAGTGGAGAAAATGGAAGCCCGATTAAAAGAAGATATCCTAAGAGAAGCTAAACACTATGGTGGTGCCATAATGGTTATTCATGAAACAGATGATAAGCATATATTTGATGCTTGGGAGGTTGTTACCCCTGATGTAATTCAAACCCCACTTGAAGTTTTCAAAAGTCTGGAAGCTGAGGGGTTCCCTGTTAAGTATGCACGTGTGCCCATCACTGATGGAAAAGCTCCTAAAAGCTCTGATTTTGACACTTTGGCAATTAATATTGCTTCTGCTGCCAAGGACACTGCTTTTGTTTTTAATTGCCAGATGGGCAGGGGCAGGACAACCACTGGTACAGTCATAGCTTGCCTTGTGAAACTTCGAGTTGATTATGGTAGGCCCATTAAAATACTGGGTGATGATGTGACCTGTGAAGAATCAGATTGTGGTTCTTCGAGTGGAGATGAAGCTGGGGCTTATGCCACTTCATTAACCTCAAATGATTTGTCAAGAAAGACGGACGAGAAACAAAATCGTGCTTTTGGTATAAATGACATCCTTCTTTTATGGAAGATAACAACATTATTTGATAATGGTGTTGAATGCCGAGAGGCATTAGATGCTATCATTGATAGATGTTCTGCACTTCAAAATATTCGTCAAGCAGTCCTGCAGTATAGAAAAGTATTCAATCAACAGCATGTTGAGCCTAGGGTAAGGAGGGTGGCATTAAATCGTGGTGCTGAGTACTTGGAGCGGTACTTTCGTCTAATTGCTTTTGCAGCATATCTTGGAAGTGAAGCATTTGATGGATTTTGTGGACAAGGAGAATCCAGAATGACATTTAAGGTTTGGTTGCATCGAAGGCCAGAGGTGCAGGCTATGAAATGGAGCATCAGATTAAGACCGGGGCGGTTTTTTACTGTTCCTGAGGAGTTGAGAGAGCCACACGAGTCTCAACATGGAGATGCTGTGATGGAGGCCATTGTCAAGGCCAGAAATGGTTCTGTTTTGGGGAAAGGCTCCATTCTGAAAATGTATTTCTTTCCTGGTCAGAGAACTTCCAGTCATATACAAATTCATGGCGCACCTCATGTTTTCAAGGTTGATGAATACCCTGTGTATTGCATGGCAACTCCAACCATCTCTGGTGCCAAAGAGATGCTAGACTATTTGGGTGCTAAGTCTAAACCTTCATTCATTGCTCAAAAGGTTGTATTGACTGATCTGAGAGAAGAGGCAGTTGTTTATATCAATTATACTCCCTTTGTCCTTAGGGAGTTAAACAAACCAGTTAATACACTCAAGTACGTGGGTATCACTGGTCCTGTGGTGGAACACATGGAAGCACGGCTAAAAGAAGATATACTAGCTGAGATTAGACAATCAGGTGGTCGAATGCTGTTACACCGTGAAGAATATAACCCCTCGACAAATCAGTCAGGTGTGGTTGGATATTGGGAAAACATTCGAGCAGATGATCTGAAGACACCTGCGGAAGTTTATTCTGCTCTGAAAGATGATGGATATGATATTGTCTACCAGAGGATTCCTTTAACAAGAGAGAGAGATGCTTTGGCATCTGATATTGATGCAATACAGTATTGTCAAGATGACTCTGCAGGTAGTTACCTTTTTGTATCACACACAGGTTTTGGTGGTGTCGCATATGCAATGGCCATAATCTGTATCCGACTTGATGCTGGATCCAAAGTCTCACAACCATTATTTGGCTCACATATACATGCAGTGACTGAAGAGAACTTACCTTCTCGAGCTTCCAATGAAACGGCACTTAGTATGGGTGACTATAGTGACATTTTGAACCTTACAAGGGTCCTCATACATGGTCCCCAAAGCAAAGCAGACGTTGACCTTGTCATTGAAAGATGTGCAGGTGCAGGGCATGTACGAGAAGATATTCTTTATTACAATAGAGAATTTGAGAAGTTCACTGATGATGATGATGATGAGGAGCGAGCTTATCTTATGGACATGGGTATCAAGGCTTTGAGGCGATATTTTTTCCTTATCACTTTCAGATCTTATCTCTACTGCACTTCTCCTGCCAATATGAAATTTGCGGCATGGATGGACGCAAGACCAGAGCTTGGTCATCTATGTAACAATCTAAGAATTGACAAATAA | 3747 | 0.4313 | MSQIPKEPEQVMKMRGGGVLGKRTILKSDHFPGCQNKRLSPQIEGAPNYRQASDSLHVHGVAIPTIDGIRNVLDHIGARLKVLWISLREEPLAYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILVEAARYGNKILVTDELPDGQMVDQWEPVSCNSVKTPLEVYEELQVAGYLVDYERVPITDEKSPKEMDFDILVNKISQADVDTEIIFNCQMGRGRTTTGMVIATLIYLNRIGASGFPRSNSIGRIFQSMTNGADHLPDSEEAIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILRQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERAALRSNTADNCSFADWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLKMIAESTDGRPSEMGVVAALRNGEVLGSQTVLKSDHCPGSQNPSLLESVDGAPNFREVPGFPVYGVANPTIDGIRSVIRRIGSSEGGHPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDRERVEKMEARLKEDILREAKHYGGAIMVIHETDDKHIFDAWEVVTPDVIQTPLEVFKSLEAEGFPVKYARVPITDGKAPKSSDFDTLAINIASAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRVDYGRPIKILGDDVTCEESDCGSSSGDEAGAYATSLTSNDLSRKTDEKQNRAFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALNRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGESRMTFKVWLHRRPEVQAMKWSIRLRPGRFFTVPEELREPHESQHGDAVMEAIVKARNGSVLGKGSILKMYFFPGQRTSSHIQIHGAPHVFKVDEYPVYCMATPTISGAKEMLDYLGAKSKPSFIAQKVVLTDLREEAVVYINYTPFVLRELNKPVNTLKYVGITGPVVEHMEARLKEDILAEIRQSGGRMLLHREEYNPSTNQSGVVGYWENIRADDLKTPAEVYSALKDDGYDIVYQRIPLTRERDALASDIDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLDAGSKVSQPLFGSHIHAVTEENLPSRASNETALSMGDYSDILNLTRVLIHGPQSKADVDLVIERCAGAGHVREDILYYNREFEKFTDDDDDEERAYLMDMGIKALRRYFFLITFRSYLYCTSPANMKFAAWMDARPELGHLCNNLRIDK | 1248 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g02521 | 1248 | CDD | PTP_paladin | 431 | 746 | - | - | |
| Phco2g02521 | 1248 | SMART | PTPlike_phytase_2 | 85 | 240 | - | - | |
| Phco2g02521 | 1248 | SMART | PTPlike_phytase_2 | 941 | 1099 | - | - | |
| Phco2g02521 | 1248 | SMART | PTPlike_phytase_2 | 503 | 659 | - | - | |
| Phco2g02521 | 1248 | CDD | PTP_paladin | 15 | 308 | - | - | |
| Phco2g02521 | 1248 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 427 | 660 | IPR029021 | - | |
| Phco2g02521 | 1248 | FunFam | Paladin isoform A | 25 | 264 | - | - | |
| Phco2g02521 | 1248 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 9 | 249 | IPR029021 | - | |
| Phco2g02521 | 1248 | Pfam | Inositol hexakisphosphate | 503 | 659 | - | - | |
| Phco2g02521 | 1248 | Pfam | Inositol hexakisphosphate | 942 | 1097 | - | - | |
| Phco2g02521 | 1248 | Pfam | Inositol hexakisphosphate | 85 | 239 | - | - | |
| Phco2g02521 | 1248 | PANTHER | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE | 427 | 1165 | - | - | |
| Phco2g02521 | 1248 | Gene3D | Protein tyrosine phosphatase superfamily | 878 | 1127 | IPR029021 | - | |
| Phco2g02521 | 1248 | Gene3D | Protein tyrosine phosphatase superfamily | 438 | 671 | IPR029021 | - | |
| Phco2g02521 | 1248 | Gene3D | Protein tyrosine phosphatase superfamily | 25 | 274 | IPR029021 | - | |
| Phco2g02521 | 1248 | FunFam | Paladin isoform B | 878 | 1129 | - | - | |
| Phco2g02521 | 1248 | FunFam | Paladin isoform A | 441 | 673 | - | - | |
| Phco2g02521 | 1248 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 861 | 1086 | IPR029021 | - |