Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02520 ATGATGGTGGCAAGTGAGCTACAAGGACTTTCCATGCCCCTGGGTTCAAAGAAGCCAACCTTCCACCATGACAAGAATTTGTCTTCCTCATTCTCTTGTAGCAGAGTGAACTTGCTTCAATCAAAGAATGTAGTATCTGGTTTTCCTTCAGGAAAATTCTTTAGTGTTGTTACACACAGAAAAACAACCAGAAGATTTTTGGCTATGTCCACTCTTGCAGATGTTGCAAATGATTTTATGGCCCTTCAATCACCAATACTTACAGGAAGAGAAGCCAACCCCAAGACTGTTGCATCGATCATATTAGGCGGAGGAGCTGGCACTCGTCTATTCCCCCTTACTCAAAGAAGGGCTAAACCTGCTGTACCATTTGGAGGATGCTATAGATTGGTGGACATACCGATGAGTAATTGCATTAACAGCGGAATTAACAAAATTTACGTCCTCACACAATTTAACTCTCAGTCCCTCAACCGACATATTGCTCGAACATATAACTTGGGAGGTTGCATCAACTTTGGAGGTGGTTTCGTTGAGGTATTGGCTGCAACTCAAACACCTGGTGAATCAGGAAAAAACTGGTTTCAGGGTACAGCTGATGCTGTAAGACAATTCCTTTGGTTGTTTGAGGACGCTGATCATAAAAATATAGAGAACATTCTGATATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGACATTGTGCAGAAGCACATTAATTCTTGTGCTGATATATCAGTATCTTGTCTCCCAGTGGATGGCAGTCGTGCCTCTGATTTTGGATTAGTGAAGGTTGATGAAAGAGGACGGATATGTCAGTTCTTAGAAAAACCCAAGGGCGAATTGTTAAGATCTATGCATGTAGATACGAGTATTTTCGGACTATCAGCTCAAGAAGCAAGGAAATTTCCGTACATCGCATCAATGGGTATATATGTGTTTAAAATAGATGTTCTGCTAAAAGTTCTCAGGGGCTGTTATCCTAATGCAAATGATTTTGGATCTGAGGTCATTCCCTTGGCTGCAAAGGATTTTAATGTCCAGGCATGTCTTTTCAATGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCGAACTTGGCTCTTATGGACCAGCCGCCCAAGTTTCAGTTTTATGACCAGTCCAAGCCTATTTTTACTTGTCCTCGGTTCCTACCACCAACTAAAATGGAGAAGTGTGAGGTAATTAACTCTTTGATTTCAGATGGTTGCTTTTTGAAAGAGTGCACAGTTGAACATTCCATTGTGGGAATTCGATCACGGCTTGATTCTGGAGTGCAGATAAAGGATACCATGATCATGGGTGCTGATTATTACCAGACAGAAGCTGAAATTGCTTCTCTTTTAGCAGCGGGAAATGTTCCAATAGGCATTGGGAAAAATACAAAAATTGTGAATTGTATAATTGACAAAAACGCAAGAATTGGAAACAATGTAATTATTGCAAACAAAGACAATGTGCAGGAAGCAGACAGAGGATCAGAGGGGTTTTATATTCGATCAGGAATCATTGTGGTGTTAAAAGACTCTGAAATACCCAATGCTACAATCATTTAA 1593 0.403 MMVASELQGLSMPLGSKKPTFHHDKNLSSSFSCSRVNLLQSKNVVSGFPSGKFFSVVTHRKTTRRFLAMSTLADVANDFMALQSPILTGREANPKTVASIILGGGAGTRLFPLTQRRAKPAVPFGGCYRLVDIPMSNCINSGINKIYVLTQFNSQSLNRHIARTYNLGGCINFGGGFVEVLAATQTPGESGKNWFQGTADAVRQFLWLFEDADHKNIENILILCGDQLYRMDYMDIVQKHINSCADISVSCLPVDGSRASDFGLVKVDERGRICQFLEKPKGELLRSMHVDTSIFGLSAQEARKFPYIASMGIYVFKIDVLLKVLRGCYPNANDFGSEVIPLAAKDFNVQACLFNGYWEDIGTIKSFFDANLALMDQPPKFQFYDQSKPIFTCPRFLPPTKMEKCEVINSLISDGCFLKECTVEHSIVGIRSRLDSGVQIKDTMIMGADYYQTEAEIASLLAAGNVPIGIGKNTKIVNCIIDKNARIGNNVIIANKDNVQEADRGSEGFYIRSGIIVVLKDSEIPNATII 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02520 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 309 319 IPR005836 GO:0005978|GO:0008878
Phco2g02520 530 Pfam Nucleotidyl transferase 99 375 IPR005835 GO:0009058
Phco2g02520 530 CDD LbH_G1P_AT_C 398 524 - -
Phco2g02520 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 194 202 IPR005836 GO:0005978|GO:0008878
Phco2g02520 530 FunFam Glucose-1-phosphate adenylyltransferase 396 530 - -
Phco2g02520 530 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 85 395 IPR029044 -
Phco2g02520 530 Gene3D Hexapeptide repeat proteins 396 530 - -
Phco2g02520 530 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 491 IPR029044 -
Phco2g02520 530 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 76 530 IPR011831 GO:0005978|GO:0008878
Phco2g02520 530 NCBIfam glucose-1-phosphate adenylyltransferase 98 494 IPR011831 GO:0005978|GO:0008878
Phco2g02520 530 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 103 122 IPR005836 GO:0005978|GO:0008878
Phco2g02520 530 CDD ADP_Glucose_PP 100 361 - -
Phco2g02520 530 SUPERFAMILY Trimeric LpxA-like enzymes 394 530 IPR011004 -
Phco2g02520 530 FunFam Glucose-1-phosphate adenylyltransferase 80 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02520 Phco-Chr2 55117503 55123337 Dispersed/Transposed