Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02516 ATGGGCAACGGCACTTCTCGTGTTGTTGGCTGTTTGGTGCCGTTTAATGGCAAGAGTGGGGTTGATTTGGAGTTTCTAGAGCCATTAGATGAAGGGTTAGGCCACTCTTTCTGTTATGTGAGGCCTTCTATTTTTGAATCTCCAGCCATTACTCCATCAAACTCTGAGAGGTTCACTGTTGATTCTAGCACCCTTGATTCTGAGACATTGAGTGGCTCATTTAGGCATGAGAGCATTGAAGAGAGGCCTGGCAAGAATGTTTCCGAAACCACATTCAAGACAATATCGGGGGCTTCGGTTAGTGCCAATGTTTCCACTGCCAGGACTGGTAACCAGAATGCTCTACTTGCTAGTGATGTTCTAGAGCCTGCAGCATCCTTTGAGGGAACCTCGTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGCGGATCTGGACCTTTGAATGGATTCATGTCGGGACCATTGGAGAGATTTGCTTCCGGTCCATTGGATAAGGGTGGTGGTTTCATGTCTGGGCCGATAGAGAAGGGAGTGATGTCAGGACCTCTTGATGCCACTGACAAGTCCAACTTCTCAGCCCCCCTTGCACGTGGTCGCCGAAGGCCACACCTCCAGCGCCTCATGAGAAGTGTGAGTGGTCCTATGAGAAACACTTTTTCTCGGACTTTTTCCAAGCACTCCATGGGTGTCAGTTGGGTGCAGCGGTTATTCCTTCATCCGGTGTCTCAACTAGCTTGGAATTCCAAAGAGACGAAGTTTCGGTCTGAAGTTTCTAGAAACTGTACTGAAGTTGGATCGTCCGAATTGGAGTATAAACATACACAAAATTTGCAGTGGGCTCATGGTAAGGCCGGTGAAGATAGGGTTCATGTTGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTATAAGTTTATAGACAAGGAATTAGAAGGGTTGCTCTGGGATTATGAAGATAATCCTGTTGATCCACTTAAATCTGAAGTCCTTAATAATGGAAATGATGTAGTTGCTCTAGAATGCGGTAGGGAGGAAATGTCTGATGGTCATAACATTTCAACTGAAGAAAGTTCTTGCTGTACAGAAACTTCTTGTCCCATAATGGTCAAGGATCAGTCGTCTAATAGTGAGATAGTGGAGGTAAATGCTGAAATTAAGGTAAATGTTGAAAAGAAAAATTGTGGAAGTCCCAGTATTGACCATCCTGTTCCTGTATCTGTTCCAATTGGACAATTGAGTGGACAGGGCAGAAGAAGTGTGCGACTTTATGAGCTACTTCAGATGGAATCTTGGAATGAACAAGTGTCAGAACAAGGCAAGGATTCTATAGTTCCTGCTGAAATAACACAAGAAAGGAAGTTGAGGTTTTGCTCATCTGATAGTAAAGAGGATAGATCTGGACACCAGGATGAATGTCCTACTACTTCAGGGGAAAATGGAGGCCCTGAGTTTAGTTCGACTAACCTAGAGCCTATAGCTCCCTTTTCTGTTTCAGGACAAAGGCAGAATACTAGAAAGTCATTTATTGGTACAAAAATCAGAAAAATGTACAGGAAACAGAAGTCCTTACGAAAGAAATTTTTTCCTTGGAGTTATGATTGGCATAGGGAGGAAACTTGTTTTGACAAGAAATTAGTGGAATCCTCAGGACCCATTAGAATATGCAAGTCTGGAGTAGATCATAATGCAGTTTTAAGAGCAATGGCTCGGGCTCTTGAAAGAACAGAAGAGGCATACTTGAAAATGGTGGAGAATAATATGGATAAAAATCCAGAGCTTGCCTTAATGGGATCATGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTCTATGTTATGAACCTAGGAGATAGTCGTGCCATTTTGGCTCAAGAACGACCAAATGATCGTCATCCTAATTTGTGTCTCGTCAAAGATGACATGAGGCATAGAAATCGTTCTAGAGAGTCATTAGTAGGCATGGAGCTGGACAGAATTTCGGAGGAGTCCCCAGTGCACAATATAAACAAGCATGTTAACAAGATAAACAAAAATCGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCTACAGATCACAGCACAAGTATAGAAGAGGAAGTTTTTAGAATACGAGCAGAACACCCTGATGATAATCAGGCCATATTTAATGATCGAGTGAAAGGACAATTAAAAGTGACCAGAGCATTTGGTGCTGGATTCCTGAAGAGGCCATGTTTAAACGAACCTCTACTGAAGATGTTTCGAGTTGATTATGTGGGCAATGGTTCTTACTTAAGTTGCGTTTCGTCTGTTGTTCATCACCGGCTTTCTTCAAGCGATCGGTTCCTGGTGCTGTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAGGAGGTAGTTGCCCATGTCACCTGGTTCATGGAAAATGTTCCCGAAGGCGATCCTGCACAATACCTTATAGCAGAGCTTCTCTTCCGTGCCGCAAAAAAAAATGGAATGGATTTTCATGAATTGCTGGATATTCCTCATGGAGATCGCCGAAAATATCATGATGATGTTTCTGTTATGGTCGTTTCCTTGGAGGGAAGGATTTGGAGATCATCCGGATAA 2664 0.4309 MGNGTSRVVGCLVPFNGKSGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTVDSSTLDSETLSGSFRHESIEERPGKNVSETTFKTISGASVSANVSTARTGNQNALLASDVLEPAASFEGTSSFAAIPLQPVPRGSGPLNGFMSGPLERFASGPLDKGGGFMSGPIEKGVMSGPLDATDKSNFSAPLARGRRRPHLQRLMRSVSGPMRNTFSRTFSKHSMGVSWVQRLFLHPVSQLAWNSKETKFRSEVSRNCTEVGSSELEYKHTQNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYKFIDKELEGLLWDYEDNPVDPLKSEVLNNGNDVVALECGREEMSDGHNISTEESSCCTETSCPIMVKDQSSNSEIVEVNAEIKVNVEKKNCGSPSIDHPVPVSVPIGQLSGQGRRSVRLYELLQMESWNEQVSEQGKDSIVPAEITQERKLRFCSSDSKEDRSGHQDECPTTSGENGGPEFSSTNLEPIAPFSVSGQRQNTRKSFIGTKIRKMYRKQKSLRKKFFPWSYDWHREETCFDKKLVESSGPIRICKSGVDHNAVLRAMARALERTEEAYLKMVENNMDKNPELALMGSCVLVMLMKDQDVYVMNLGDSRAILAQERPNDRHPNLCLVKDDMRHRNRSRESLVGMELDRISEESPVHNINKHVNKINKNREISMCRLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPCLNEPLLKMFRVDYVGNGSYLSCVSSVVHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPEGDPAQYLIAELLFRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02516 887 SUPERFAMILY PP2C-like 283 879 IPR036457 -
Phco2g02516 887 CDD PP2Cc 584 878 IPR001932 -
Phco2g02516 887 SMART PP2C_4 271 876 IPR001932 -
Phco2g02516 887 MobiDBLite consensus disorder prediction 492 523 - -
Phco2g02516 887 Gene3D - 244 416 IPR036457 -
Phco2g02516 887 Gene3D - 466 884 IPR036457 -
Phco2g02516 887 Pfam Protein phosphatase 2C 598 647 IPR001932 -
Phco2g02516 887 Pfam Protein phosphatase 2C 703 849 IPR001932 -
Phco2g02516 887 MobiDBLite consensus disorder prediction 476 523 - -
Phco2g02516 887 MobiDBLite consensus disorder prediction 476 491 - -
Phco2g02516 887 PANTHER PROTEIN PHOSPHATASE 2C 273 877 IPR015655 GO:0004722|GO:0006470
Phco2g02516 887 ProSiteProfiles PPM-type phosphatase domain profile. 269 878 IPR001932 -
Phco2g02516 887 FunFam Protein phosphatase 2C 32 248 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02516 Phco-Chr2 55090853 55095561 Transposed