Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02506 ATGGAGAACCGACACCACCGTGAATTGACCTTCTTAAGCTCCGGTGGCGACTTCCTCAACCCCCCTTTGGATCACACAACCCACAACACCGATTCTACCATCAAAGAAATGGACTTCTTCTCATCAACTTCATCCCCAGCTACTAATAAAAACAATAATACCAATCATATCAACCATGATCATCAGAAGCATGTTGGAAATCAAGATCGCACTCATCGCCAAGGATCACCAACACACGTCTCGCATCACCCTGTAAACACCGGACTGAATTTAACTTGTGTGAGTACTGGAGTGACAAAAGAAGAAAATGGTGAAAACCCTGAAGCTGAGCTGAGTTCTCTTGAAAGTCAATTGCGGAGACTACAAGAAGATAATCGCAAGTTGAGAACTGTGCTGGACCAGATTACCAGAAGCTATACCCAACTACAAGCTCAGCTATTCATAACTCTGCAGAAACAAAAGCTTCATCAGAATAGTACAGAAGCAAATGGGATTGTGTCGGGAAAAAAAAATGTGGACCCAGCTGGAGCATGCAGCAAGTTAGAGGTGGTGAATGATGCATCGGTTTGTGATGAAAAGACTGATGGTGAGGTATCGGTTTGTCGCTCAAACAACGTGGAGGAATTGTCAAAGACACATGATGAGGCTCCTCAATTGATTAAACTGAATCTTGGAAAACAGGCTTGTCCTGATGCTGCAGAAGATGTTCTTGACCGGTCCTCCTCTCAGAGCTGGGGCTCAAACAAGTTAGAAGAACAACACAAAACTGCAGAACAAGTTGCTGCAGATCAGATTCCTCTCAGGAAAGCCAGGGTTTCCGTACGAGCAAGATCAGAAGCTCCACTGATCAGCGATGGTTGTCAATGGAGGAAATATGGACAGAAAATGGCGAAGGGTAACCCTTGCCCTCGTGCTTACTATCGCTGCACTATGGCTGTAGGATGCCCAGTGCGCAAACAGGTGCAGAGATGCGCAGAAGACAAGACAGTGTTGATAACAACCTACGAAGGTAATCACAATCACCCTCTGCCACCAGCTGCCACTGCCATGGCAAGTACCACGTCAGCAGCCGCCGCCATGCTCCTCTCAGGTTCAACACCCAGCAAGGAAGCCCTCACAAACTCTGCAGGATATTACTCTTCACTTCCCTATGCTTCAATGGCAACCCTATCAGCTTCAGCACCATTCCCAACCATTACTCTCGACTTAACCCAAAACCCCAACGCCATGCACCTCCACCGTGCACCACCCCATGCCACTGCGTTCCCTCTCCCACTGCATGCTTCCGGTGGCCCCCACCTTCTAGGCCACCCCTTGTTCTTCTCACAGAAGCTTCCACCTGCGGCATCGCCCCTACTTCATCCACGACAACCTTCATCTATGGTCGAAACGGTTAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCAGCTTTGGCAGCAGCAATCTCCTCAATCATTGGAGTACCAAGAGGCAGTGATGGTGGCAACAATGGAAGTAATGGTGCCATTGGGTCACCCCAGCTTCCTCAGTCATGCACTACTTTCTCCACCAACTAG 1560 0.4853 MENRHHRELTFLSSGGDFLNPPLDHTTHNTDSTIKEMDFFSSTSSPATNKNNNTNHINHDHQKHVGNQDRTHRQGSPTHVSHHPVNTGLNLTCVSTGVTKEENGENPEAELSSLESQLRRLQEDNRKLRTVLDQITRSYTQLQAQLFITLQKQKLHQNSTEANGIVSGKKNVDPAGACSKLEVVNDASVCDEKTDGEVSVCRSNNVEELSKTHDEAPQLIKLNLGKQACPDAAEDVLDRSSSQSWGSNKLEEQHKTAEQVAADQIPLRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATAMASTTSAAAAMLLSGSTPSKEALTNSAGYYSSLPYASMATLSASAPFPTITLDLTQNPNAMHLHRAPPHATAFPLPLHASGGPHLLGHPLFFSQKLPPAASPLLHPRQPSSMVETVSAAIASDPNFTAALAAAISSIIGVPRGSDGGNNGSNGAIGSPQLPQSCTTFSTN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02506 519 MobiDBLite consensus disorder prediction 497 519 - -
Phco2g02506 519 MobiDBLite consensus disorder prediction 23 55 - -
Phco2g02506 519 Coils Coil 111 145 - -
Phco2g02506 519 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 99 496 IPR044810 GO:0003700
Phco2g02506 519 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g02506 519 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g02506 519 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g02506 519 Pfam WRKY DNA -binding domain 285 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g02506 519 MobiDBLite consensus disorder prediction 71 89 - -
Phco2g02506 519 MobiDBLite consensus disorder prediction 1 89 - -
Phco2g02506 519 MobiDBLite consensus disorder prediction 56 70 - -
Phco2g02506 519 FunFam probable WRKY transcription factor 31 268 345 - -
Phco2g02506 519 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02506 Phco-Chr2 54981178 54984840 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco2g02506 WRKY 5.4e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02506 2 54981178 54984840 Phco6g01380 6 13909965 13912476 PCT