Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco2g02504 | ATGAGGGATGACTGTGACAAAGATTTTTTTTTTCACAATTTACGGTTAAGATGTTACCATAGAGCAATAAAAGGATTTCTCGAGTGTAAGAAATTAAAGAGGGCGGAGGGAGCACAGCTGAACACTTTATCTGAAAGTGAAAACCCTAGAGTCAACCGTTGCGCCACAATCGCTCTCGCGCGTTTCGTTCGCCTTCGGCATCTTTGCAACGGGATCAGGTGCTCGTCCTTCACCATGGCGGGGACTGAAGCCAAAAAGCCTTCTGCTAAGCAATCCGGTGCGAAGAAGAAGGAGGTGAAGAAGGAGACTGGCTTAGGTCTCACGCATCGGAAGGCGGACAACTTCGGAGAGTGGTATTCCGAGGTTGTTGTTAATGCGGAAATGATTGAATACTATGATATATCTGGTTGCTATATTCTGAGGCCTTGGTCAATGGCAATATGGGAGATCATGCAAGAGTTTTTCGATCCGGAAATAAAGAAAATGAAAATCAAGAACTGCTACTTCCCTTTGTTTGTGTCTCCTGGAGTCTTGCAAAAGGAGAAGGATCACGTTGAGGGTTTTGCTCCTGAGGTTGCTTGGGTAACAAAGTCCGGGGAATCTGAATTAGAAATTCCTATTGCTATTCGTCCAACCAGTGAAACTGTCATGTATCCCTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGTGTAATGTTGTTAGATGGGAGTTCAGCAATCCCACGCCATTCATCAGGAGTCGCGAGTTTCTTTGGCAAGAAGGGCACACTGCTTTTGCAACAAAGGAGGAAGCAGATGCAGAGGTTCTTGACATTCTGGAATTATATAGACGTATATATGAAGAGTATTTGGCAGTTCCTGTCATAAAGGGTAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGGCTTTACACTACCAGTGTTGAGGCATTTATTCCGAACACTGGTCGTGGTATACAAGGTGCAACTTCTCATTGTCTGGGCCAAAACTTTGCTAAAATGTTTGAGATAAACTTTGAAAATGATAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGTACTCGAACTATTGGGGTCATGGTGATGGTTCATGGTGATGACAAGGGATTGGTACTGCCTCCTAAAGTCGCATCAGTACAAGTCATTGTGATTCCTGTGCCTTACAAAGATGCTAATACTCAAGGAATCTTTGATGCCTGTTCTGCAACTGTGAATGCATTGTCTGAAGCAGGTATTCGTGCTGAGTCGGATTTTAGAGATAATTATTCTCCAGGATGGAAGTATTCTCACTGGGAAATGAAAGGTGTTCCTCTAAGAATTGAAATTGGGCCAAAAGATTTAGCGAATAAGCAGGTTCGTGCTGTTCGACGTGATAATGGAGCAAAGATAGACATTGCTAGTGCTGATTTGGCTGTTGAAATAAAGAAGTTGCTTGATAATATTCAACAGAACCTGTTTGATGTTGCAAAACAAAAACGAGATGAATGCATTCAGGTCATACACACTTGGGATGAATTTGTGCAAGCTTTGAACCAAAGAAAAATGATCTTAGCTCCATGGTGTGATGAGGAGGAGGTGGAGGCTGATGTCAAAGCAAGAACTAAGGGTGAGATGGGAGCCTCTAAGACTCTTTGCAGCCCCTTTGATCAGCCAGAACTCCCTGAAGGCACTAAGTGCTTTGCATCTGGAAAGCCTGCAACAAAGTGGACATACTGGGGCAGAAGTTACTAG | 1767 | 0.4358 | MRDDCDKDFFFHNLRLRCYHRAIKGFLECKKLKRAEGAQLNTLSESENPRVNRCATIALARFVRLRHLCNGIRCSSFTMAGTEAKKPSAKQSGAKKKEVKKETGLGLTHRKADNFGEWYSEVVVNAEMIEYYDISGCYILRPWSMAIWEIMQEFFDPEIKKMKIKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGESELEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLDILELYRRIYEEYLAVPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENDKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDANTQGIFDACSATVNALSEAGIRAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDNGAKIDIASADLAVEIKKLLDNIQQNLFDVAKQKRDECIQVIHTWDEFVQALNQRKMILAPWCDEEEVEADVKARTKGEMGASKTLCSPFDQPELPEGTKCFASGKPATKWTYWGRSY | 588 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco2g02504 | 588 | SUPERFAMILY | C-terminal domain of ProRS | 511 | 588 | IPR017449 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | CDD | ProRS_core_arch_euk | 114 | 375 | IPR033721 | - | |
| Phco2g02504 | 588 | PANTHER | PROLYL-TRNA SYNTHETASE | 83 | 588 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | SUPERFAMILY | Class II aaRS and biotin synthetases | 113 | 379 | IPR045864 | - | |
| Phco2g02504 | 588 | Pfam | tRNA synthetase class II core domain (G, H, P, S and T) | 207 | 373 | IPR002314 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Phco2g02504 | 588 | NCBIfam | proline--tRNA ligase | 110 | 588 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | Pfam | Anticodon binding domain | 392 | 488 | IPR004154 | - | |
| Phco2g02504 | 588 | Gene3D | - | 386 | 506 | IPR036621 | - | |
| Phco2g02504 | 588 | Gene3D | - | 509 | 588 | IPR017449 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | SUPERFAMILY | Class II aaRS ABD-related | 380 | 507 | - | - | |
| Phco2g02504 | 588 | ProSiteProfiles | Aminoacyl-transfer RNA synthetases class-II family profile. | 170 | 385 | IPR006195 | - | |
| Phco2g02504 | 588 | FunFam | Proline--tRNA ligase, cytoplasmic | 509 | 588 | - | - | |
| Phco2g02504 | 588 | FunFam | Bifunctional glutamate/proline--tRNA ligase | 107 | 385 | - | - | |
| Phco2g02504 | 588 | Gene3D | Bira Bifunctional Protein; Domain 2 | 108 | 385 | IPR045864 | - | |
| Phco2g02504 | 588 | PRINTS | Prolyl-tRNA synthetase signature | 207 | 218 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | PRINTS | Prolyl-tRNA synthetase signature | 237 | 245 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | PRINTS | Prolyl-tRNA synthetase signature | 247 | 258 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | PRINTS | Prolyl-tRNA synthetase signature | 166 | 184 | IPR002316 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | FunFam | bifunctional glutamate/proline--tRNA ligase | 386 | 506 | - | - | |
| Phco2g02504 | 588 | CDD | ProRS_anticodon_zinc | 381 | 588 | - | - | |
| Phco2g02504 | 588 | Hamap | Proline--tRNA ligase [proS]. | 108 | 588 | IPR004499 | GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | Pfam | Prolyl-tRNA synthetase, C-terminal | 515 | 588 | IPR016061 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 | |
| Phco2g02504 | 588 | SMART | ProRS_C_1_2 | 515 | 588 | IPR016061 | GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 |