Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02478 ATGGAGGATCAGATTGCAGGGAATAGGGGAGGTGTTTTGTTGGTGAACCTGCATTTATATGAAGTAGGAATTATGCAAAACAACTTGTGTAAGCAGCTTTGCCAAAACACCAACAGCCAACTCCATGATGTTTTGCTGTTCTGTTTTTCTGCAGAATTTAATAAGCATAATTCTGCAGTTATATTAGTTGGAGCTTATGCGTTTCGCTGCATAATTAGAAGTGCAGAAGCAGAGTGCTTTTTTTTTTTTGGTACAGCATTGCAGCAGCTGAGTCTATTAGCACGAGCAACTCGATTTTCTTCATCTTTGTTTCTAGTCATGAATGTTATATATAAGACTGAGTTTCTAGTCACTTTGCGCAGAAGCAAGGAGAAGCCATATTACAAGATGTCCAAACAAAGGTTGCAGAGTAAGGTGGCTATAGTCACCGGTGGAGCTGGCGGAATAGGAGCAGAAGCGGTGAGGATATTTATCGAAAACGGAGCATCGGTGGTCATAGCAGACATGAAGGACGAATTAGGTCACAAGTATGCTACTTCATTTGGTTCAGAGAAAGTGAGTTACCACCACTGTGACGTGAGAAACGAGAAGCACGTTGAAGAAACAGTAGCTTTCGCGGTGGAGAAATACGGCAGCTTAGACATCTTGTTCAGCAATGCTGGCATCGCGGGTCCTTTGTCAAGCATTCTTACCTTCGATCTCAACGAATTTGACAACACCATGGTCGTGAATCTTCGCGGTGCAGCAGCATTCATCAAGCACGCGGCACGTGTCATGGTGGAAAGGAAGACACGTGGATCCATAATCTGCACGGCTAGCGTGGCTGGTTCCTTCGCCGGATGCGCGGGTCATGATTACACCGCATCCAAACACGCCCTTATCGGGCTTGTTCGGTCGACGTGTAGCGAGCTTGGAGCTTATGGCATAAGAGTGAACTCCATTTCACCTTATGCAGTTGCCACGCCTCTTAGTTGTGAAGCCTTAGATATGAAGGATAGTGAAGTTGAAGCTGCAGGGCATGCGTTAGGGAATTTGCATGGAATCACTTTGAAGGCTAGTCATATTGCAGAAGCTGCTCTGTTTCTTGCTTCTGATGAATCGGCTTATATCAGTGGAGATAACTTGATCGTGGACGGAGGTTTCTCCGTTGTTAATCGCGGTCTTCCAAGTATTAAAAATTAA 1182 0.4492 MEDQIAGNRGGVLLVNLHLYEVGIMQNNLCKQLCQNTNSQLHDVLLFCFSAEFNKHNSAVILVGAYAFRCIIRSAEAECFFFFGTALQQLSLLARATRFSSSLFLVMNVIYKTEFLVTLRRSKEKPYYKMSKQRLQSKVAIVTGGAGGIGAEAVRIFIENGASVVIADMKDELGHKYATSFGSEKVSYHHCDVRNEKHVEETVAFAVEKYGSLDILFSNAGIAGPLSSILTFDLNEFDNTMVVNLRGAAAFIKHAARVMVERKTRGSIICTASVAGSFAGCAGHDYTASKHALIGLVRSTCSELGAYGIRVNSISPYAVATPLSCEALDMKDSEVEAAGHALGNLHGITLKASHIAEAALFLASDESAYISGDNLIVDGGFSVVNRGLPSIKN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02478 393 Gene3D - 126 388 - -
Phco2g02478 393 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 131 386 - -
Phco2g02478 393 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 211 222 IPR002347 -
Phco2g02478 393 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 286 305 IPR002347 -
Phco2g02478 393 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 266 274 IPR002347 -
Phco2g02478 393 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 273 301 IPR020904 GO:0016491
Phco2g02478 393 FunFam Short-chain dehydrogenase reductase 128 385 - -
Phco2g02478 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 137 383 IPR036291 -
Phco2g02478 393 PRINTS Glucose/ribitol dehydrogenase family signature 345 365 IPR002347 -
Phco2g02478 393 PRINTS Glucose/ribitol dehydrogenase family signature 260 276 IPR002347 -
Phco2g02478 393 PRINTS Glucose/ribitol dehydrogenase family signature 211 222 IPR002347 -
Phco2g02478 393 PRINTS Glucose/ribitol dehydrogenase family signature 286 305 IPR002347 -
Phco2g02478 393 PRINTS Glucose/ribitol dehydrogenase family signature 139 156 IPR002347 -
Phco2g02478 393 PRINTS Glucose/ribitol dehydrogenase family signature 307 324 IPR002347 -
Phco2g02478 393 Coils Coil 388 393 - -
Phco2g02478 393 Pfam Enoyl-(Acyl carrier protein) reductase 144 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02478 Phco-Chr2 54814251 54816672 Tandem