Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02469 ATGGATGTTAACATGAAGAAATCACGGTCCAAGGAAGAGGTGCAGAATAGTGAAGACACTAGAAAAGGTCCATGGAGCGTTGAAGAGGACACTCTTCTCCAAAATTACGTTGCCACCCACGGCGACGGTCGCTGGAACTCCGTCGCACGCTGCCTTAAGAGATCGGGGAAAAGTTGCAGGCTAAGATGGTTAAACTACTTGCGCCCCGATGTTCGTCGAGGAAATATAACACTCCAAGAACAGATAACCATTCTGGACCTTCACTCTCGGTGGGGCAATAGGTGGTCGAAAATTGCTCGGCATCTTCCCGGTAGAACGGACAACGAAATAAAGAATTATTGGAGGACTCGTGTGATTAAACAAGCAAGAAGTCTGAAGTGTGACGTGGACAGTAAACAGTTCAAAGATGCCTTGCGTTACGTGTGGATGCCCCGTTTGATTGAGCGGATTCAACCGTCACCGGAAACTCACGACCCGCCCCATGTGTCTCCTTCCAAACTTTACCCGAACCCAACTCCTCTGCTCCATCACCAAAACGGGTTACACGGTTCGTGTTCAGGTTCCAGTAGTGCCTTGGACTCATCATCAAGTGCCAAGTTGGAGACTCCTTTAGAGTGTGAAGGTTTGGGCCATAATGTTTCAGTTTCGGGCGTATGTGAGCGAGACTTGGAACAGGGGAATATCACGCTACCTTTAGGTGGTGGGGACTCAATGGAGAGTTTGTGGGATGATCAGAATCTGTGGCTTATGCAACAACTTTGTGATGATCTGGAAATTCAAGACAATTTCCTTGCGTGA 798 0.4825 MDVNMKKSRSKEEVQNSEDTRKGPWSVEEDTLLQNYVATHGDGRWNSVARCLKRSGKSCRLRWLNYLRPDVRRGNITLQEQITILDLHSRWGNRWSKIARHLPGRTDNEIKNYWRTRVIKQARSLKCDVDSKQFKDALRYVWMPRLIERIQPSPETHDPPHVSPSKLYPNPTPLLHHQNGLHGSCSGSSSALDSSSSAKLETPLECEGLGHNVSVSGVCERDLEQGNITLPLGGGDSMESLWDDQNLWLMQQLCDDLEIQDNFLA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02469 265 MobiDBLite consensus disorder prediction 151 173 - -
Phco2g02469 265 Gene3D - 77 118 - -
Phco2g02469 265 Gene3D - 23 72 - -
Phco2g02469 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 67 IPR017930 -
Phco2g02469 265 FunFam MYB transcription factor 77 140 - -
Phco2g02469 265 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 185 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phco2g02469 265 CDD SANT 24 67 IPR001005 -
Phco2g02469 265 CDD SANT 77 116 IPR001005 -
Phco2g02469 265 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Phco2g02469 265 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Phco2g02469 265 MobiDBLite consensus disorder prediction 1 24 - -
Phco2g02469 265 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Phco2g02469 265 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Phco2g02469 265 SMART sant 72 120 IPR001005 -
Phco2g02469 265 SMART sant 21 69 IPR001005 -
Phco2g02469 265 FunFam Myb transcription factor 22 72 - -
Phco2g02469 265 SUPERFAMILY Homeodomain-like 20 114 IPR009057 -
Phco2g02469 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02469 Phco-Chr2 54728814 54729876 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco2g02469 Myb_DNA-binding 2.7e-15 CL0123