Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02449 ATGGACACTGATGCAAGTGCCTCCCCCCAACCTGAGTCAGAACCATCTTCAGAGCTCAAATCATCAGATACTCAAACATCAAAGAAAAGGAAAATGGTTGAGAAAACAGTTGTGGCAGTGAGGATAGGAGAGAATGTTGGCAAGCTCAAGAATGAAGGGCTACCTTCGGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGGTCTCCATATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCCTCAACGCTCATCATCACATATACCTCTGCGCATAACCATCCATGCCCCACCACCATCACCACAAATTCACCCCAGCAACCAAAAGAATCCGAATCCGAAACCACCCAAGACCTCTCAGCTACCTCAAAGGAGGAAGATCTAGAACATAATATAGAAGAAGAGCAAAGGGGTAATAAGCCCAATGATGAAGAAAAATTTCTTTACTTGCAATCTCCAATACGATGCTCCCAAGACCTAATAATCGAACAAGAAGACCCTTTCAAGCTAAACACGGAGAAAAGCCATGAAAGAATAGATCTCCTCTTGGAGGAGGAAGAAGAACCCCTTTATTATGAACCAGTCAAGAACTTGTCTGCTTCCAAAAATGAAGAACTTGATTTTTTCGACGAGCTTGAGGAGTTGCCCATGTCTTCATCTTTCTTGCCCTTCACAAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGA 777 0.435 MDTDASASPQPESEPSSELKSSDTQTSKKRKMVEKTVVAVRIGENVGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASTLIITYTSAHNHPCPTTITTNSPQQPKESESETTQDLSATSKEEDLEHNIEEEQRGNKPNDEEKFLYLQSPIRCSQDLIIEQEDPFKLNTEKSHERIDLLLEEEEEPLYYEPVKNLSASKNEELDFFDELEELPMSSSFLPFTRSIFSDERIPVAPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02449 258 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g02449 258 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g02449 258 MobiDBLite consensus disorder prediction 138 163 - -
Phco2g02449 258 MobiDBLite consensus disorder prediction 1 22 - -
Phco2g02449 258 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 239 IPR044810 GO:0003700
Phco2g02449 258 FunFam WRKY transcription factor 65 39 116 - -
Phco2g02449 258 MobiDBLite consensus disorder prediction 1 32 - -
Phco2g02449 258 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phco2g02449 258 MobiDBLite consensus disorder prediction 114 137 - -
Phco2g02449 258 MobiDBLite consensus disorder prediction 114 164 - -
Phco2g02449 258 Gene3D WRKY domain 42 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phco2g02449 258 SUPERFAMILY WRKY DNA-binding domain 53 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02449 Phco-Chr2 54560582 54561895 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phco2g02449 WRKY 1.7e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02449 2 54560582 54561895 Phco2g02449 2 54560582 54561895 ECH