Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02447 ATGGAAATTCACCAATTTTCATCCACAGCTCTAAATTTAAAAGAAATCCTTGTGGGTTATGGCTCTGCACAAGAGGATGTGTTCAAAGGGAAAGAGAGTTTCTCTGGAATGGAATTGCTAGGACCTATTCAGGATGAAAAAGGAACCAAATTGTTGGAGGATGAAGATCAGAAACAGCTACAAGAACTCGAAGTTGATGAGTTGTTAGAAGAGTTTAACTGTGACCATGATGTGCAGGAATTGGATGAAACTACAGGGCCAGCGAAATATGACATAGAATCAGCTGAACACAATAAGCAGGTGCCACCATTATTAGCATCCTTAGAGCTGCTGAGAAACTACGGAAGCAGATTTAAGAGGCTAAGCGAGCAAAATATAACGAAACCTTCTTTGGAACATCACCAGATATCAACTGAAGAAATAATGAGAGTGGCTGGAGCAAGATATGTTCAATATTCTGCACATTGGAATGATAGTTTTTGCATCCCTATGCACCCATACGGATTGGATTTTGGTGGTTTGTCTGAGGAAGAAAATAGAGACGTAGAACTTGTTCAGTTTCTCCTTGCTGCAGCTGAGAGGGTAGGTTGCCAACAATTTGAACGTGCAAGCAAGTTACTTCTCCACTGTCAACGGAATTCATCAGCCAATGCCAGCCCTGTTCAGAGAGTTATCTTTCACTTCGCTCAAGCACTTCGAGAGAGAATCGACAGAGGACTAGGAAGGATGACAGCTAAGGGATCAGAGAAAAATGAAGAAGTGGAGTTAATTCAAAAGCTTGACACCAAAGTTGCCCTAACATGCCATAAAAATATTCCTTTCAATCAAGTCATGCAATTCACTGGAATACAAGCTATAGCGGAACATGTTGCATCTAAGACCAAAATTCATCTTATTGATCTTGAAAGTGTAAGTGGGGTGCACGATACAGTTTTGATGCAAGCACTGACTGAACGCCAGGATTGCAAAGTGCAACTTTTCAAGATAACTGCACTTGCACTGCATTCATACAAAACCATGATACAAGAGACTGGAAAAAGGTTAGCTAGCTTTGCTGAATCCTTGAACTTACCCTTCTCATATAATGCGGTTTTTGTGACAGACTTTGCAGACATAAGGAAAGATGATTTTGAAATTGGAGAGGATGAAGTTGTGGCTGTCTACTCTCCATATTTTCTGAGGTGCATGGTATCAAGGCCAGATTGTATGGAAAACTTGATGAGGGTTATATGGAATATCAAGCCGGTTATAATGATAGTCCTTGAAGTTGAAGCAAATCATAACTCACCCTTCTTTGTGAACCGCTTCATTGAAGCGTTGTTCTTCTACTCAGCATTTTTTGATTGCCTTGGAAGCTGCATGAATCATGAGATTGAGTGCAGAATGAAAATAGAAGCAGTATTATCTGAGGGGATACGGGACATTGTTGCAATGGAAGGGAGGGAAAGAAAAGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACCGAATGGTGGAAATCGGGTTCAGTGAGTCATCTCTTTACCAAGCTCACTTGGTCAACAAAGAGTTTGCTTTTGGGAAATTCTGCACTGTAGACAAGAATGACAAGTGTCTTTTAGTTGGATGGAAAGGGACCCCACTTCATTCAATCTCAGCTTGGAGATTTCTTTGA 1668 0.4065 MEIHQFSSTALNLKEILVGYGSAQEDVFKGKESFSGMELLGPIQDEKGTKLLEDEDQKQLQELEVDELLEEFNCDHDVQELDETTGPAKYDIESAEHNKQVPPLLASLELLRNYGSRFKRLSEQNITKPSLEHHQISTEEIMRVAGARYVQYSAHWNDSFCIPMHPYGLDFGGLSEEENRDVELVQFLLAAAERVGCQQFERASKLLLHCQRNSSANASPVQRVIFHFAQALRERIDRGLGRMTAKGSEKNEEVELIQKLDTKVALTCHKNIPFNQVMQFTGIQAIAEHVASKTKIHLIDLESVSGVHDTVLMQALTERQDCKVQLFKITALALHSYKTMIQETGKRLASFAESLNLPFSYNAVFVTDFADIRKDDFEIGEDEVVAVYSPYFLRCMVSRPDCMENLMRVIWNIKPVIMIVLEVEANHNSPFFVNRFIEALFFYSAFFDCLGSCMNHEIECRMKIEAVLSEGIRDIVAMEGRERKVRNVKIDVWRRFFARYRMVEIGFSESSLYQAHLVNKEFAFGKFCTVDKNDKCLLVGWKGTPLHSISAWRFL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02447 555 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 132 546 IPR005202 -
Phco2g02447 555 ProSiteProfiles GRAS family profile. 175 553 IPR005202 -
Phco2g02447 555 Coils Coil 51 71 - -
Phco2g02447 555 Pfam GRAS domain family 184 553 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02447 Phco-Chr2 54548558 54550860 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco2g02447 GRAS 1.4e-77 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02447 2 54548558 54550860 Phco2g02447 2 54548558 54550860 ECH